Role of UDP-rhamnose and UDP-galacturonic acid biosynthetic genes in pectic synthesis

UDP-鼠李糖和UDP-半乳糖醛酸生物合成基因在果胶合成中的作用

• 批准号: 0453664
• 负责人: Maor Bar-Peled
• 金额: $ 80万
• 依托单位: University of Georgia Research Foundation Inc
• 依托单位国家: 美国
• 项目类别: Continuing Grant
• 财政年份: 2005
• 资助国家: 美国
• 起止时间: 2005-02-01 至 2012-01-31
• 项目状态: 已结题
• 来源: https://www.nsf.gov/awardsearch/showAward?AWD_ID=0453664&HistoricalAwards=false
• 关键词: Role; UDP; rhamnose; galacturonic; acid

The proposed research tests the hypothesis that the amount and location of synthesis of nucleotide-sugar substrates plays a role in the regulation of pectin synthesis. Pectin is a family of plant complex cell wall polysaccharides involved in cell-cell adhesion, plant defense, plant development and cell-cell communication. The long-term goal is to elucidate the biological roles of pectins and the genes involved in their synthesis and assembly. Here the regulation and synthesis of two immediate precursors of pectin synthesis, UDP-galacturonic acid (UDP-GalA) and UDP-rhamnose (UDP-Rha), will be studied. All pectins contain galacturonic acid in their backbones and the RG-I backbone contains both GalA and Rha. RG-II also has Rha and GalA in its side chains. Recombinant Arabidopsis enzymes that convert UDP-glucose to UDP-Rha and recombinant epimerases that convert UDP-GlcA to UDP-GalA have been functionally cloned and biochemically characterized by the PIs. Two gene families containing three UDP-Rha synthases (URhaS) and six UDP-GlcA epimerase (UGlcAEp) isoforms have been identified in Arabidopsis. The UGlcAEp isoforms are divided into three distinct classes (A, B, and C) predicted to determine their subcellular residency. The UDP-RhaSyn members contain a linker domain that differs among the isoforms.An understanding of how these UDP-sugars are supplied to the various pectin biosynthetic enzymes in different Golgi cisternae is crucial to understand how pectins are synthesized. For example, it is not known if different isoforms of UGlcAEp are localized to different endomembranes. Unlike vertebrates, plants produce numerous nucleotide-sugar isozymes. There is evidence that plants produce multiple NDP-sugar synthase isoforms to provide the diverse activated sugars required for complex polysaccharide synthesis. To elucidate the biological roles of UDP-GlcA epimerase and UDP-Rha synthase isoforms the following research goals are proposed: (1) Determine the enzymatic properties of the UGlcAEp and URhaS isoforms. Complete biochemical characterization of each isoform will identify isoform-specific enzyme properties. (2) Analyze the wall structure of T-DNA mutants to determine if any of the UGlcAEp or URhaS isoforms are involved in the synthesis of a particular pectic polymer. (3) Characterize the subcellular location of the native UGlcAEp's (or of GFP fusions) and determine if the native URhaS's (or GFP fusions) are associated with membranes. Antibodies raised toward distinct isoforms will be used to establish by electron-microscopy whether different isoforms are localized to unique endomembranes. Antibodies specific to UDP-RhaSyn isoforms (or to GFP-fusions) will address whether the enzymes are soluble or membrane associated.The broader impact of the proposed research. Both PIs have a strong commitment to educating undergraduates, graduate students, and postdocs and currently have 6 minority researchers in their labs. The PIs will use the University of Georgia Summer Undergraduate Research Program (SURP) and the SURP-Bridge program to recruit future minority students. The students funded by this research will receive training in cell wall biochemistry, cell biology and molecular biology; a rare combination of expertises that are required to effectively understand wall biology. Intellectual merit- The proposed research tests the hypothesis that the synthesis of pectin is regulated by the expression of specific nucleotide-sugar synthase isoforms and will establish whether the nucleotide-sugar synthase isoforms are localized to different Golgi cisternae. The mutant analyses are expected to provide insight into the biological roles of pectin and provide novel substrates for pectin biosynthetic glycosyltransferases.

本研究验证了核苷酸糖底物合成的数量和位置在果胶合成中起调节作用的假设。果胶是一类复杂的植物细胞壁多糖，参与细胞间粘附、植物防御、植物发育和细胞间通讯。长期目标是阐明果胶的生物学作用以及参与其合成和组装的基因。本文将研究果胶合成的两种直接前体，udp -半乳糖醛酸（UDP-GalA）和udp -鼠李糖（UDP-Rha）的调控和合成。所有果胶的主干都含有半乳糖醛酸，而RG-I主干同时含有GalA和Rha。RG-II在其侧链上也有Rha和GalA。将udp -葡萄糖转化为UDP-Rha的重组拟南芥酶和将UDP-GlcA转化为UDP-GalA的重组表戊酶已经被功能克隆并通过pi进行了生化表征。在拟南芥中发现了两个包含3个UDP-Rha合成酶（URhaS）和6个UDP-GlcA epimase （UGlcAEp）亚型的基因家族。UGlcAEp亚型被分为三个不同的类别（A， B和C），预测它们的亚细胞驻留。UDP-RhaSyn成员包含不同同工异构体的连接体结构域。了解这些udp糖是如何供应给不同高尔基池中的各种果胶生物合成酶的，对于了解果胶是如何合成的至关重要。例如，目前尚不清楚UGlcAEp的不同异构体是否定位于不同的细胞膜。与脊椎动物不同，植物产生大量的核苷酸-糖同工酶。有证据表明，植物产生多种ndp糖合成酶异构体，以提供复杂多糖合成所需的各种活性糖。为了阐明UDP-GlcA外旋酶和UDP-Rha合成酶同工型的生物学作用，提出了以下研究目标：(1)确定UGlcAEp和URhaS同工型的酶学性质。每个异构体的完整生化表征将确定异构体特异性酶的性质。(2)分析T-DNA突变体的壁结构，以确定是否有任何UGlcAEp或URhaS同工型参与特定果胶聚合物的合成。(3)确定原生UGlcAEp（或GFP融合）的亚细胞位置，并确定原生URhaS（或GFP融合）是否与膜有关。针对不同同种异构体产生的抗体将用于通过电子显微镜确定不同同种异构体是否定位于独特的内膜。针对UDP-RhaSyn异构体（或gfp融合物）的特异性抗体将确定酶是可溶的还是膜相关的。拟议研究的更广泛影响。两个pi都致力于培养本科生、研究生和博士后，目前他们的实验室里有6名少数民族研究人员。pi将使用佐治亚大学夏季本科生研究计划（SURP）和SURP- bridge计划来招收未来的少数民族学生。本研究资助的学生将接受细胞壁生物化学、细胞生物学和分子生物学的培训；一个罕见的专业知识的组合，需要有效地了解壁生物学。智力价值-拟议的研究验证了果胶的合成受特定核苷酸糖合酶异构体的表达调节的假设，并将确定核苷酸糖合酶异构体是否定位于不同的高尔基池。突变体分析有望为了解果胶的生物学作用提供新的见解，并为果胶生物合成糖基转移酶提供新的底物。