Collaborative Research: MIP: Pressure Influences on Microbial Life in the Puerto Rico Trench

合作研究：MIP：压力对波多黎各海沟微生物生命的影响

• 批准号: 0801793
• 负责人: Douglas Bartlett
• 金额: $ 39.22万
• 依托单位: University of California-San Diego Scripps Inst of Oceanography
• 依托单位国家: 美国
• 项目类别: Standard Grant
• 财政年份: 2008
• 资助国家: 美国
• 起止时间: 2008-08-15 至 2012-07-31
• 项目状态: 已结题
• 来源: https://www.nsf.gov/awardsearch/showAward?AWD_ID=0801793&HistoricalAwards=false
• 关键词: Collaborative; Research; MIP; Pressure; Influences

Pressure is a physical parameter which influences the evolution and distribution of microbial life. Far from Earth?s surface, deep ocean trenches represent the upper boundaries of pressure in the biosphere. This is where scientists can study high pressure adaptations in their most extreme forms. No studies have yet characterized the diversity of microbial life in trenches. In order to do this, Doug Bartlett from UC San Diego and Wilford Schmidt from Univ. Puerto Rico-Mayaguez, will be using an untethered, free-falling, pressured-hardened device to sample bacterial and archaeal life in the deepest trench in the Atlantic Ocean, the Puerto Rico Trench (PRT), at a depth of 8.4 km (5.2 mi). They will profile the ambient environment in which these prokaryotes live (pressure, temperature, salinity, and current velocity). They will also chemically analyze the trench seawater and carry out total microbial cell counts and probe-based counts of particular microbial groups, perform DNA extractions and isolate and culture deep-dwelling microorganisms. It is these last two goals that are at the heart of the project. They will use the DNA to characterize the trench microbial community via indicator genes and community fingerprint techniques. Cultivation of these high pressuring loving microbes (called ?piezophiles?) is difficult since the culture vessels are under very high pressure and the samples are difficult to manipulate. The Bartlett laboratory has the expertise to culture piezophiles and so a major effort will be made to isolate pure cultures of some of the major microbial groups observed in the PRT, including members of the class ?Alphaproteobacteria?, order Flavobacteriales, order Planctomycetales, and subclass marine group I Crenarchaeota. They will also characterize the physiology and taxonomy of particular isolates. In the long term, these investigators are interested in studying the effect of decompression or pressurization on deep-trench or surface-water microbial assemblages because they are interested in understanding the unique abilities of piezophiles to survive and grow under very high pressures. Bartlett and Schmidt will develop outreach programs for pre-college and university students, in Puerto Rico and in southern California, to teach them about this research. Their efforts will include the development of a marine microbiology laboratory class. They will also create highlights from their research for the Birch Aquarium's Deep Ocean Exhibit.

压力是影响微生物生命演化和分布的物理参数。 远离地球？在地球表面，深海海沟代表了生物圈压力的上限。科学家们可以在这里研究最极端形式的高压适应。 目前还没有研究表明战壕中微生物的多样性。 为了做到这一点，来自加州大学圣地亚哥分校的Doug Bartlett和来自波多黎各-马亚圭斯大学的Wilford施密特将使用一种无绳、自由下落、加压硬化的设备，在大西洋最深的海沟，即波多黎各海沟（PRT），8.4公里（5.2英里）深处采集细菌和古生物样本。 他们将描绘这些原核生物生活的周围环境（压力，温度，盐度和流速）。 他们还将对海沟海水进行化学分析，并对特定微生物群进行总微生物细胞计数和基于探针的计数，进行DNA提取，并分离和培养深居微生物。 最后两个目标是该项目的核心。他们将使用DNA通过指示基因和群落指纹技术来表征海沟微生物群落。 培养这些高压力的爱好微生物（称为？piezophiles？）这是困难的，因为培养容器处于非常高的压力下并且样品难以操作。 巴特利特实验室具有培养嗜压菌的专业知识，因此将做出重大努力，分离PRT中观察到的一些主要微生物组的纯培养物，包括类？α变形菌？，黄杆菌目、浮菌目和海生泉古菌亚纲I组。 他们还将描述特定分离株的生理学和分类学特征。 从长远来看，这些研究人员有兴趣研究减压或加压对深沟或地表水微生物群落的影响，因为他们有兴趣了解嗜压生物在非常高的压力下生存和生长的独特能力。 巴特利特和施密特将为波多黎各和加州南部的大学预科生和大学生开发外展项目，向他们传授这项研究。他们的努力将包括发展一个海洋微生物学实验班。他们还将从他们的研究中为桦树水族馆的深海展览创造亮点。