Function of U1 snRNP in Formation of the Spliceosome

U1 snRNP 在剪接体形​​成中的功能

• 批准号: 1157892
• 负责人: Daniel Pomeranz Krummel
• 金额: $ 60万
• 依托单位: Brandeis University
• 依托单位国家: 美国
• 项目类别: Continuing Grant
• 财政年份: 2012
• 资助国家: 美国
• 起止时间: 2012-06-01 至 2017-05-31
• 项目状态: 已结题
• 来源: https://www.nsf.gov/awardsearch/showAward?AWD_ID=1157892&HistoricalAwards=false
• 关键词: Function; U1; snRNP; Formation; Spliceosome

Intellectual merit. Most human protein-coding genes contain the primary protein-coding regions (exons) interrupted by non-coding regions (introns). In the process of precursor-mRNA splicing, the introns must be excised and the exons spliced together to generate an mRNA transcript suitable for translation into protein. Precursor-mRNA splicing is catalyzed by a remarkably large and highly dynamic "machine", the spliceosome. The spliceosome is formed by the assembly onto a precursor-mRNA transcript of five RNA-protein complexes or U snRNPs. We lack a clear understanding of how the U snRNPs initiate spliceosome assembly and organize the spliceosome for catalysis. This gap in knowledge is due in large part to experimental challenges posed by the spliceosome's large size, dynamic properties, and necessity to use crude cell extract for its study. The aim of this project is to elucidate how the initial events in the assembly of the U snRNPs onto a precursor-mRNA transcript contribute to formation of an active spliceosome that exhibits high fidelity. To accomplish this long-term goal, this project will utilize new and innovative methods designed to "trap" the spliceosome at early intermediate states of its reaction cycle and to aid the visualization of its structure.Broader impact. A long-term goal of this project is to lay the foundation for an educational initiative aimed at motivating students to engage in science and be exposed to how understanding structure provides insight into function. Using new media, this project aims to create an educational outreach that will engage high school students in the sciences and provide their science teachers with training and professional development on integration of new media and macromolecular structures into their classrooms.

智力上的优点。大多数人类蛋白质编码基因含有被非编码区（内含子）中断的主要蛋白质编码区（外显子）。在剪接体-mRNA剪接的过程中，内含子必须被切除，外显子剪接在一起以产生适于翻译成蛋白质的mRNA转录物。前体mRNA剪接是由一个非常大的和高度动态的“机器”，剪接体催化。剪接体是由5个RNA-蛋白质复合物或U snRNP组装到一个寡核苷酸-mRNA转录物上形成的。我们缺乏一个清晰的理解，如何启动剪接体组装和组织剪接体的催化。这种知识上的差距在很大程度上是由于剪接体的大尺寸、动态特性以及使用粗细胞提取物进行研究的必要性所带来的实验挑战。本项目的目的是阐明如何在组装的U snRNP到一个转录子的mRNA转录的初始事件有助于形成一个活跃的剪接体，表现出高保真度。为了实现这一长期目标，该项目将利用新的和创新的方法，旨在“捕获”剪接体在其反应周期的早期中间状态，并帮助其结构的可视化。该项目的长期目标是为旨在激励学生参与科学的教育举措奠定基础，并了解如何理解结构提供对功能的洞察力。利用新媒体，该项目旨在创建一个教育推广活动，使高中学生参与科学，并为他们的科学教师提供关于将新媒体和大分子结构融入课堂的培训和专业发展。