Collaborative Research: RUI: Genomic approaches to comparative phylogeography in a biodiversity hotspot

合作研究：RUI：生物多样性热点比较系统发育地理学的基因组方法

• 批准号: 1258205
• 负责人: John McCormack
• 金额: $ 30万
• 依托单位: Occidental College
• 依托单位国家: 美国
• 项目类别: Continuing Grant
• 财政年份: 2013
• 资助国家: 美国
• 起止时间: 2013-03-15 至 2017-02-28
• 项目状态: 已结题
• 来源: https://www.nsf.gov/awardsearch/showAward?AWD_ID=1258205&HistoricalAwards=false
• 关键词: Collaborative; Research; RUI; Genomic; approaches

This project addresses how, when, and why organisms diversify and become distinct species. The focal system is an under-studied biodiversity hotspot: Mexican pine-oak woodlands. Sampling of 34 emblematic vertebrates will occur across four major mountain ranges in Mexico and linked regions in the United States. Species include 21 birds, 4 amphibians, and 9 reptiles. DNA data will be collected using novel techniques that capture hundreds of genomic regions, which will be assayed to determine: (1) if there are overlooked cryptic species; (2) whether common barriers (e.g. lowland regions) have influenced diversification across species; and (3) whether the timing of species origins coincides with periods of mountain building or glacial cycling through deep time.This study will uncover new biodiversity in a part of the world that is known for its species richness and that is under severe threat from habitat loss. Knowing the basic units of biodiversity is the first step toward mitigating such threats. This study will also help understand how biodiversity is generated and over what timescale. All specimens collected will be deposited in natural history collections at two U.S. museums, and will be available for many other studies -- natural history collections are public repositories of biodiversity with virtually limitless future potential on subjects ranging from public health and disease to basic science.

这个项目解决了生物如何，何时以及为什么多样化并成为独特的物种。焦点系统是一个研究不足的生物多样性热点：墨西哥松树橡树林地。34种典型脊椎动物的采样将发生在墨西哥的四个主要山脉和美国的相关地区。物种包括21种鸟类，4种两栖动物和9种爬行动物。将使用捕获数百个基因组区域的新技术收集DNA数据，并对其进行分析以确定： (1)是否有被忽视的神秘物种;（2）共同的障碍（例如低地地区）是否影响了物种的多样性;（3）物种起源的时间是否与造山运动或冰川循环的时间相吻合。了解生物多样性的基本单位是减轻这些威胁的第一步。这项研究还将有助于了解生物多样性是如何产生的，以及在什么时间尺度上产生的。收集的所有标本将存放在美国两个博物馆的自然历史收藏中，并将用于许多其他研究-自然历史收藏是生物多样性的公共知识库，在从公共卫生和疾病到基础科学的主题上具有几乎无限的未来潜力。