CAREER: Myco-fluidics -- Mathematics at the interface of fluid dynamics and fungal biology
CAREER: Myco-fluidics -- Mathematics at the interface of fluid dynamics and fungal biology
批准号:
1351860
负责人:
Marcus Roper
金额:
$42.5万
依托单位国家:
美国
项目类别:
Continuing Grant
财政年份:
2014
资助国家:
美国
项目状态:
已结题
起止时间:
2014-07-01 至 2021-06-30
中文摘要
该项目将数学建模和物理实验相结合,研究真菌的扩散和生长,并预测真菌将如何响应我们不断变化的地球。这个项目的数学工作包括概率论、最优化、动力系统、流体力学和新模型的合成。解决的主要生物学问题是:(I)自适应真菌网络是如何形成的,它们如何针对混合和运输进行优化?(Ii)这些网络中的流量如何自组织以消除拥塞?(Iii)真菌利用什么适应来控制其孢子的传播?该项目将开发将物理、遗传学和环境联系起来的跨学科教学和研究方法。通过对数学和生物专业的研究生和本科生进行跨学科培训,教学和研究相结合。将开发强调社会影响的新的本科生数学建模研讨会和课程。本科生研究人员将被指导做出关键的研究贡献。人类、哺乳动物、鱼类、爬行动物和植物仅代表地球巨大生物多样性的锋芒。地球上的大多数多细胞物种都是未被描述的,要么存在于植物内部,要么埋在土壤和灌木丛中。数以百万计的这些未被描述的物种被认为是真菌。增加我们对这些物种的了解很重要,因为新出现的真菌疾病威胁到我们的森林、农作物和野生动物,对社会构成了危险。该项目将提供真菌网络中的适应机制模型和真菌扩散所涉及的物理过程。这些模型将为预测哪些真菌能够适应和扩散到新的栖息地以及它们这样做的速度提供一个平台。所发现的由真菌传输网络使用的策略可以应用于各种其他环境中的调度问题,例如交通或数据网络。
英文摘要
This project combines mathematical modeling and physical experiments to study the dispersal and growth of fungi and to predict how fungi will respond to our changing Earth. The mathematical work in this project includes probability theory, optimization, dynamical systems, fluid mechanics, and the synthesis of new models. The central biological questions addressed are: (i) How do adaptive fungal networks form and how are they optimized for mixing and transport? (ii) How does the flow in these networks self-organize to eliminate congestion? (iii) What adaptations are used by fungi to control their spore dispersal? This project will develop interdisciplinary teaching and research methods connecting physics, genetics and the environment. Teaching and research are integrated through the interdisciplinary training of graduate and undergraduate students in mathematics and biology. New undergraduate mathematical modeling seminars and classes that emphasize societal impacts will be developed. Undergraduate researchers will be mentored to make key research contributions.Humans, mammals, fish, reptiles and plants represent only a razor's edge of the Earth's immense biodiversity. Most of the Earth's multicellular species are undescribed and lie inside of plants or buried in the soil and undergrowth. Millions of these undescribed species are thought to be fungi. Increasing our knowledge of these species is important because emerging fungal diseases pose a danger to society by threatening our forests, crops and wildlife. This project will provide mechanistic models of adaptation in fungal networks and the physical processes involved in fungal dispersal. These models will provide a platform for predicting which fungi are capable of adapting and dispersing into new habitats and the rate at which they will do so. The discovered strategies used by fungal transport networks can be applied to scheduling problems in a variety of other settings such as traffic or data networks.
期刊论文(1)
专著(0)
科研奖励(0)
会议论文
Fast asymptotic-numerical method for coarse mesh particle simulation in channels of arbitrary cross section
任意截面通道中粗网格粒子模拟的快速渐近数值方法
DOI:
10.1016/j.jcp.2022.111622
发表时间:
2022
期刊:
Journal of Computational Physics
影响因子:
4.1
作者:
[Christensen, Samuel, Chu, Raymond, Anderson, Christopher, Roper, Marcus]
通讯作者:
Roper, Marcus
Asymptotic Analysis and Fast Computation for Predictive Design of Inertial Microfluidic Devices
-
批准号:2009317
-
项目类别:Standard Grant
-
资助金额:$26.32万
-
财政年份:2020
-
负责人:Marcus Roper
-
依托单位:
REU Site: Mathematical Modeling at UCLA
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批准号:1659676
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项目类别:Standard Grant
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资助金额:$30.0万
-
财政年份:2017
-
负责人:Marcus Roper
-
依托单位:
国内基金
海外基金
生防链霉菌Men-myco-93-63中nsdB等调控基因的克隆及功能验证
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批准号:31171894
-
项目类别:面上项目
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资助金额:62.0万元
-
批准年份:2011
-
负责人:李亚宁
-
依托单位:
生防链霉菌Men-myco-93-63遗传转化体系及其调控序列的研究
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批准号:30800734
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项目类别:青年科学基金项目
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资助金额:24.0万元
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批准年份:2008
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负责人:李亚宁
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依托单位:
MYCO基因在青光眼发病中的分子机制及其基因转移的研究
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批准号:30070798
-
项目类别:面上项目
-
资助金额:18.0万元
-
批准年份:2000
-
负责人:张忠志
-
依托单位: