Collaborative Research: Evolution, Diversification, and Conservation of a Megadiverse Flagship Lichen Genus

合作研究:巨型多样性旗舰地衣属的进化、多样化和保护

基本信息

  • 批准号:
    1354631
  • 负责人:
  • 金额:
    $ 22.3万
  • 依托单位:
  • 依托单位国家:
    美国
  • 项目类别:
    Standard Grant
  • 财政年份:
    2014
  • 资助国家:
    美国
  • 起止时间:
    2014-08-01 至 2019-07-31
  • 项目状态:
    已结题

项目摘要

Lichens are symbiotic associations between a fungus and one or more algae or cyanobacteria. They perform critical ecological functions such as soil stability and water purification in many ecosystems. The lichen genus Sticta performs an important function in forest and woodland ecosystems in temperate and tropical regions. Due to their large size and capacity to store and release large amounts of water, these lichens contribute to the water cycle, including in regions that are water reservoirs for urban areas. Most species contain cyanobacteria that fix atmospheric nitrogen and thus function as biological fertilizers. Sticta species are particularly sensitive indicators of ecological disturbance, air pollution and global climate change, and have therefore disappeared from many habitats over vast geographical regions in the Northern Hemisphere. Although Sticta includes 120 species, genetic data suggest that perhaps as many as 400 species await discovery throughout the world, particularly in tropical mountains. An international team of researchers seeks to fully elucidate Sticta diversity using modern genomic approaches, and reconstruct its evolutionary history to further our understanding of the role of global climatic shifts and geological events on the diversification of these symbiotic fungi. This knowledge is critical in understanding and conserving their important ecological roles they play for our society. The project also contains components of citizen science and outreach materials aimed at public education and ecotourism.This project brings together a broad array of tools to elucidate the evolution and diversification of Sticta within a framework of historical biogeography, including a combination of traditional and next-generation DNA sequencing methods to test the viability of DNA barcoding for a large lichen fungal genus. The research will begin with targeted collection of Sticta specimens which will be used for DNA sequence and morphological analyses. Using phylogenetic methods the project will infer species delimitations, divergence dates among lineages, biogeography, ecological niche and morphological character state reconstructions. Novel approaches that effectively integrate molecular and morphological data are implemented. This includes morphology-based phylogenetic binning to place historical type specimens within the molecular phylogeny. These tools will resolve the biodiversity questions within Sticta and generate tools essential to their identification. The evolution of phenotypes and photosymbiodemes (lichens that include two different types of photobionts) and their importance for the understanding of morphogenesis and interactions of fungal and algal or cyanobacterial partners in lichens will be studied. The project trains two postdocs and includes two international workshops.
地衣是真菌与一种或多种藻类或蓝藻之间的共生关系。它们在许多生态系统中发挥着关键的生态功能,如土壤稳定和水净化。地衣属针茅在温带和热带地区的森林和林地生态系统中发挥着重要的作用。由于它们的大小和储存和释放大量水的能力,这些地衣有助于水循环,包括在城市地区的水库地区。大多数物种都含有蓝藻,它们可以固定大气中的氮,从而起到生物肥料的作用。针茅物种是生态干扰、空气污染和全球气候变化的特别敏感指标,因此已经从北半球广大地理区域的许多栖息地消失。尽管Sticta包括120个物种,但遗传数据表明,世界各地可能有多达400个物种等待发现,特别是在热带山区。一个国际研究小组试图利用现代基因组学方法全面阐明Sticta的多样性,并重建其进化史,以进一步了解全球气候变化和地质事件对这些共生真菌多样性的作用。这些知识对于理解和保护它们在我们社会中扮演的重要生态角色至关重要。该项目还包括针对公众教育和生态旅游的公民科学和宣传材料的组成部分。该项目汇集了一系列广泛的工具,以在历史生物地理学的框架内阐明Sticta的进化和多样性,包括结合传统和新一代DNA测序方法来测试大型地衣真菌属DNA条形码的可行性。这项研究将从有针对性地收集Sticta标本开始,这些标本将用于DNA序列和形态分析。利用系统发育学方法,该项目将推断物种划分、谱系之间的分歧日期、生物地理、生态位和形态特征状态重建。实现了有效集成分子和形态数据的新方法。这包括基于形态的系统发育分类,将历史模式标本置于分子系统发育中。这些工具将解决STITTA内的生物多样性问题,并产生识别它们所必需的工具。将研究表型和光共生体(地衣包括两种不同类型的光生物)的演变及其对了解地衣中真菌与藻类或蓝藻配对的形态发生和相互作用的重要性。该项目培训了两名博士后,并包括两个国际讲习班。

项目成果

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Bernard Goffinet其他文献

Comparative analysis using a chromosome-scale genome assembly for Funaria hygrometrica suggests greater collinearity in mosses than in seed plants
使用细叶小羽藓的染色体规模基因组组装进行的比较分析表明,苔藓中的共线性高于种子植物。
  • DOI:
    10.1038/s42003-025-07749-x
  • 发表时间:
    2025-02-28
  • 期刊:
  • 影响因子:
    5.100
  • 作者:
    Alexander Kirbis;Nasim Rahmatpour;Shanshan Dong;Jin Yu;Lucas Waser;Huaxing Huang;Nico van Gessel;Manuel Waller;Ralf Reski;Daniel Lang;Stefan A. Rensing;Eva M. Temsch;Jill L. Wegrzyn;Bernard Goffinet;Yang Liu;Péter Szövényi
  • 通讯作者:
    Péter Szövényi
Diversity, Phylogeny, and historical biogeography of the genus emCoccocarpia/em (lichenized Ascomycota: Peltigerales) in the tropics
热带的肉果衣属(地衣型子囊菌:地卷目)的多样性、系统发育和历史生物地理学
  • DOI:
    10.1016/j.ympev.2025.108312
  • 发表时间:
    2025-05-01
  • 期刊:
  • 影响因子:
    3.600
  • 作者:
    Luis Fernando Coca;H.Thorsten Lumbsch;Joel A. Mercado-Díaz;Todd J. Widhelm;Bernard Goffinet;Paul Kirika;Robert Lücking
  • 通讯作者:
    Robert Lücking
The ecology and evolution of fly dispersed dung mosses (Family Splachnaceae): Manipulating insect behaviour through odour and visual cues
蝇传播粪藓(Splachnaceae 科)的生态与进化:通过气味和视觉线索操纵昆虫行为
  • DOI:
    10.1007/bf03182289
  • 发表时间:
    2009-01-01
  • 期刊:
  • 影响因子:
    2.000
  • 作者:
    Paul Marino;Robert Raguso;Bernard Goffinet
  • 通讯作者:
    Bernard Goffinet
DNA based revised geographic circumscription of species of Physcomitrella s.l. (Funariaceae): P. patens new to East Asia and P. magdalanae new to East Africa
基于 DNA 修订的 Physcomitrella s.l. 物种地理范围
  • DOI:
    10.1639/0007-2745-118.1.022
  • 发表时间:
    2015
  • 期刊:
  • 影响因子:
    0
  • 作者:
    Rafael Medina;Yang Liu;Wang Li-Song;Guo Shuiliang;Kristoffer Hyl;er;Bernard Goffinet
  • 通讯作者:
    Bernard Goffinet
DNA based revised geographic circumscription of species of Physcomitrella s.l. (Funariaceae): P. patens new to East Asia and P. magdalanae new to East Africa
  • DOI:
    DOI: 10.1639/0007-2745-118.1.022
  • 发表时间:
    2015
  • 期刊:
  • 影响因子:
  • 作者:
    Rafael Medina;Yang Liu;Wang Li-Song;Guo Shuiliang;Kristoffer Hylander;Bernard Goffinet
  • 通讯作者:
    Bernard Goffinet

Bernard Goffinet的其他文献

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{{ truncateString('Bernard Goffinet', 18)}}的其他基金

Collaborative Proposal: Diversity of Physcomitrium pyriforme in North America and Europe: significance of autopolyploidy within a phylogenomic and experimental framework
合作提案:北美和欧洲梨形立碗盆菌的多样性:系统发育和实验框架内同源多倍体的重要性
  • 批准号:
    1753811
  • 财政年份:
    2018
  • 资助金额:
    $ 22.3万
  • 项目类别:
    Continuing Grant
Dissertation Research: Resolving bipolar phylogeographic histories in dispersal limited mosses: a RAD-Seq approach
论文研究:解决分散有限苔藓中的双极系统发育地理学历史:RAD-Seq 方法
  • 批准号:
    1311405
  • 财政年份:
    2013
  • 资助金额:
    $ 22.3万
  • 项目类别:
    Standard Grant
Collaborative Research: AToL: Assembling the Pleurocarp Tree of Life: Resolving the rapid radiation using genomics and transcriptomics
合作研究:AToL:组装侧果生命树:利用基因组学和转录组学解决快速辐射问题
  • 批准号:
    1240045
  • 财政年份:
    2013
  • 资助金额:
    $ 22.3万
  • 项目类别:
    Standard Grant
Rapid radiation and sporophyte evolution in the Funariaceae: inferences from phylogenomics and cross generational cuticle development studies
葫芦科植物的快速辐射和孢子体进化:系统基因组学和跨代角质层发育研究的推论
  • 批准号:
    1146295
  • 财政年份:
    2012
  • 资助金额:
    $ 22.3万
  • 项目类别:
    Continuing Grant
Joint bryophyte genomics and phylogenetics conference: Moss2012 and 3rd International Conference on Molecular Systematics of Bryophytes-New York Botanical Gardens, June 14-23,2012
苔藓植物基因组学和系统发育联合会议:Moss2012 和第三届苔藓植物分子系统学国际会议-纽约植物园,2012 年 6 月 14-23 日
  • 批准号:
    1212505
  • 财政年份:
    2012
  • 资助金额:
    $ 22.3万
  • 项目类别:
    Standard Grant
Reduction & reversal in the Funariaceae: phylogenetic perspective on sporophyte complexity and role of the calyptra
减少
  • 批准号:
    0919284
  • 财政年份:
    2009
  • 资助金额:
    $ 22.3万
  • 项目类别:
    Standard Grant
DISSERTATION RESEARCH: Genetic consequences of the shift to asexuality in bryophytes: Insights from the hornwort <I>Megaceros aenigmaticus</I>
论文研究:苔藓植物向无性转变的遗传后果:来自金鱼藻<I>Megaceros aenigmaticus</I>的见解
  • 批准号:
    0910258
  • 财政年份:
    2009
  • 资助金额:
    $ 22.3万
  • 项目类别:
    Standard Grant
ATOL: Collaborative Research - Assembling the Liverwort Tree of Life: A Window into the Evolution and Diversification of Early Land Plants
ATOL:合作研究 - 组装地钱生命树:了解早期陆地植物进化和多样化的窗口
  • 批准号:
    0531557
  • 财政年份:
    2006
  • 资助金额:
    $ 22.3万
  • 项目类别:
    Continuing Grant
Dissertation Research: Chloroplast Evolution of the Nonphotosynthetic Liverwort Cryptothallus Mirabilis (Aneuraceae)
论文研究:非光合地钱Cryptothallus Mirabilis(Aneuraceae)的叶绿体进化
  • 批准号:
    0408043
  • 财政年份:
    2004
  • 资助金额:
    $ 22.3万
  • 项目类别:
    Standard Grant
Collaborative: Phylogenetic and Geographic Patterns in Moss Diversity
合作:苔藓多样性的系统发育和地理模式
  • 批准号:
    0089633
  • 财政年份:
    2001
  • 资助金额:
    $ 22.3万
  • 项目类别:
    Continuing Grant

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