2nd Workshop on Biological Distributed Algorithms (BDA 2014)

第二届生物分布式算法研讨会(BDA 2014)

基本信息

  • 批准号:
    1443291
  • 负责人:
  • 金额:
    $ 2万
  • 依托单位:
  • 依托单位国家:
    美国
  • 项目类别:
    Standard Grant
  • 财政年份:
    2014
  • 资助国家:
    美国
  • 起止时间:
    2014-09-01 至 2015-08-31
  • 项目状态:
    已结题

项目摘要

General description:The goal of the workshop is to bring together computer scientists and biologists interested in studying the relationships between distributed algorithms and biological systems with the aim of benefiting both fields through joint studies.Distributed systems are prevalent in computer science and biology. Both domains rely on networks of interacting entities - molecules, cells, and organisms in biology; mobile and autonomous robot devices in computer science - to reach joint decisions, coordinate responses to inputs, and to route resources and navigate through challenging environments. Both also seek solutions to these problems that are efficient, robust, and adaptive with respect to changes expected in natural and competitive environments. To explore these shared properties and goals and to determine whether progress made in one of these domains can be used to assist work in the other domain, PIs have organized the BDA workshop to bring together scientists from both areas for a two day meeting in Austin. TX.Technical description:The connections mentioned above between the two areas suggest that by thinking computationally about the settings, requirements, and goals of information processing within distributed biological systems, researchers can achieve two complementary goals: First, they can use insights about how biological systems solve computational problems to aid in designing more flexible, robust, and adaptive novel distributed algorithms. Second, they can use, develop, or adapt existing distributed computing theory to help understand the behavior of biological systems and propose new, testable hypotheses to determine how well such models fit the observed behavior of the biological system. To enable such cross-disciplinary research, PIs have organized the BDA workshop. For this year's workshop, the plan is to primarily focus on relationships between distributed problems in computer science and problems related to communication and coordination in insect colonies (e.g. foraging, navigation, task allocation, construction) and to networks in the brain (e.g. learning, decision-making, attention). Other topics for submissions include: synchronization, communication models inspired by biological systems, and flocking behavior.The workshop will have invited talks from leaders in both the distributed computing and biological communities. There will also be contributed talks from researchers working in the interface of the two domains and a poster session presenting early stage work linking biological and computational distributed computing. To leverage existing interest amongst computer scientists, the workshop is co-located with one of the premiere and long-standing conferences in distributed computing (DISC: The International Symposium on Distributed Computing), which will be held in Austin, TX in October 2014.
研讨会的目标是将对研究分布式算法和生物系统之间的关系感兴趣的计算机科学家和生物学家聚集在一起,目的是通过联合研究使这两个领域受益。分布式系统在计算机科学和生物学中很普遍。这两个领域都依赖于相互作用的实体网络--生物学中的分子、细胞和有机体;计算机科学中的移动和自主机器人设备--以达成联合决策,协调对投入的反应,并在具有挑战性的环境中路由资源和导航。双方还寻求有效、稳健和适应自然和竞争环境中预期变化的解决方案来解决这些问题。为了探讨这些共同的特点和目标,并确定在其中一个领域取得的进展是否可以用来协助另一个领域的工作,私营部门组织了BDA研讨会,将这两个领域的科学家聚集在一起,在奥斯汀举行为期两天的会议。技术描述:上面提到的这两个领域之间的联系表明,通过计算思考分布式生物系统中信息处理的设置、要求和目标,研究人员可以实现两个互补的目标:第一,他们可以利用对生物系统如何解决计算问题的见解来帮助设计更灵活、更健壮和更适应的新型分布式算法。其次,他们可以使用、开发或调整现有的分布式计算理论来帮助理解生物系统的行为,并提出新的、可测试的假设来确定这些模型与生物系统观察到的行为的匹配程度。为了能够进行这种跨学科的研究,私人投资机构组织了BDA研讨会。对于今年的研讨会,计划主要集中在计算机科学中的分布式问题与与昆虫群体中的通信和协调(例如,觅食、导航、任务分配、构建)以及与大脑中的网络(例如,学习、决策、注意力)有关的问题之间的关系。提交的其他主题包括:同步、生物系统启发的通信模型和集群行为。研讨会将邀请分布式计算和生物界的领导人发表演讲。还将有致力于这两个领域接口的研究人员的演讲,以及展示连接生物和计算分布式计算的早期工作的海报会议。为了利用计算机科学家现有的兴趣,研讨会与将于2014年10月在德克萨斯州奥斯汀举行的分布式计算首届和长期会议之一(DISC:分布式计算国际研讨会)设在同一地点。

项目成果

期刊论文数量(0)
专著数量(0)
科研奖励数量(0)
会议论文数量(0)
专利数量(0)

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Ziv Bar-Joseph其他文献

Identifying indications for novel drugs using electronic health records
  • DOI:
    10.1016/j.compbiomed.2024.109158
  • 发表时间:
    2024-12-01
  • 期刊:
  • 影响因子:
  • 作者:
    Lukas Adamek;Greg Padiasek;Chaorui Zhang;Ingrid O’Dwyer;Nicolas Capit;Flavio Dormont;Ramon Hernandez;Ziv Bar-Joseph;Brandon Rufino
  • 通讯作者:
    Brandon Rufino
Studying and modelling dynamic biological processes using time-series gene expression data
利用时间序列基因表达数据研究和模拟动态生物过程
  • DOI:
    10.1038/nrg3244
  • 发表时间:
    2012-07-18
  • 期刊:
  • 影响因子:
    52.000
  • 作者:
    Ziv Bar-Joseph;Anthony Gitter;Itamar Simon
  • 通讯作者:
    Itamar Simon
Computational discovery of gene modules and regulatory networks
基因模块和调控网络的计算发现
  • DOI:
    10.1038/nbt890
  • 发表时间:
    2003-10-12
  • 期刊:
  • 影响因子:
    41.700
  • 作者:
    Ziv Bar-Joseph;Georg K Gerber;Tong Ihn Lee;Nicola J Rinaldi;Jane Y Yoo;François Robert;D Benjamin Gordon;Ernest Fraenkel;Tommi S Jaakkola;Richard A Young;David K Gifford
  • 通讯作者:
    David K Gifford

Ziv Bar-Joseph的其他文献

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{{ truncateString('Ziv Bar-Joseph', 18)}}的其他基金

Collaborative Research: RECODE: Directed Differentiation of Human Liver Organoids via Computational Analysis and Engineering of Gene Regulatory Networks
合作研究:RECODE:通过基因调控网络的计算分析和工程定向分化人类肝脏类器官
  • 批准号:
    2134998
  • 财政年份:
    2022
  • 资助金额:
    $ 2万
  • 项目类别:
    Standard Grant
Collaborative Research: ABI Innovation: BCSP: Understanding the design and usage of distributed biological networks
合作研究:ABI 创新:BCSP:了解分布式生物网络的设计和使用
  • 批准号:
    1356505
  • 财政年份:
    2014
  • 资助金额:
    $ 2万
  • 项目类别:
    Continuing Grant
I-Corps: ExpressionBlast
I军团:ExpressionBlast
  • 批准号:
    1242525
  • 财政年份:
    2012
  • 资助金额:
    $ 2万
  • 项目类别:
    Standard Grant
Collaborative Research: Cross Species Analysis of Biological Systems Using Expression Data
合作研究:使用表达数据对生物系统进行跨物种分析
  • 批准号:
    0965316
  • 财政年份:
    2010
  • 资助金额:
    $ 2万
  • 项目类别:
    Continuing Grant
CAREER: Modeling Dynamic Systems in the Cell
职业:细胞内动态系统建模
  • 批准号:
    0448453
  • 财政年份:
    2005
  • 资助金额:
    $ 2万
  • 项目类别:
    Continuing Grant

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