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CAREER: Combining Research and Education via the Exploration of Peptide-Lipid Binding and Aggregation

CAREER: Combining Research and Education via the Exploration of Peptide-Lipid Binding and Aggregation
职业:通过探索肽-脂质结合和聚集将研究和教育结合起来
批准号:
1454948
负责人:
Silvina Matysiak
金额:
$65.0万
依托单位国家:
美国
项目类别:
Continuing Grant
财政年份:
2015
资助国家:
美国
项目状态:
已结题
起止时间:
2015-07-01 至 2022-06-30

项目摘要

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中文摘要
翻译
通过这一奖项,化学部生命过程化学项目资助马里兰大学园区分校的Silvina Matysiak博士研究脂类成分如何影响脂膜上的多肽自组装途径。该项目涉及使用计算方法来确定在几种淀粉样多肽的情况下,类脂头基的化学如何促进多肽的招募、错误折叠和聚集。这些研究将提供促进或阻碍多肽自组装的重要条件的基本信息,以及对所产生的聚集体的形态负责的关键条件。该项目的结果可能被用来理解神经元中的蛋白质错误折叠如何导致神经元功能障碍。作为该项目的一部分,将创建几个工具箱,向高中和本科生的父母和学生传授分子相互作用在日常世界中的重要性。为了实现这一目标,活细胞或动画的实时视频将与蛋白质的交互动手建模相结合。在理解蛋白质如何错误折叠和聚集在细胞膜上方面存在着根本的差距。该项目涉及一项旨在阐明膜成分如何调节淀粉样多肽聚集的计算研究。更深入地了解膜表面多肽聚集背后的驱动力将对从生物材料到生物技术的许多学科产生影响。这些方法涉及在该项目的背景下扩展先前开发的粗粒度模型。该项目旨在1)研究多肽-脂质氢键在多肽聚集中的作用,2)量化静电相互作用在形成聚集途径中的影响,3)剖析多价离子在脂域形成中的影响以及这种影响是如何影响多肽能量格局的,以及4)表征膜物理性质的变化如何改变多肽聚集行为。在本奖项中开发的计算模型将免费向公众提供。
英文摘要
With this award, the Chemistry of Life Processes Program in the Chemistry Division is funding Dr. Silvina Matysiak from The University of Maryland, College Park to investigate how lipid composition affects peptide self-assembly pathways on a lipid membrane. The project involves the use of computational methods to establish how the chemistry of a lipid headgroup promotes peptide recruitment, misfolding and aggregation in the cases of several amyloidogenic peptides. These studies will provide fundamental information on vital conditions that promote or impede peptide self-assembly and that are responsible for the morphology of the resulting aggregates. The results of this project may be used to understand how protein misfolding in neurons may lead to neuronal dysfunction. As part of the project, several toolboxes will be created to teach parents and students at the high school and undergraduate levels, the importance of molecular interactions in the everyday world. In order to achieve this goal, real-time videos of living cells or animations will be combined with interactive hands-on modeling of proteins.There is a fundamental gap in understanding how proteins misfold and aggregate on cellular membranes. This project involves a computational investigation that aims at elucidating how membrane composition modulates amyloid peptide aggregation. A deeper understanding of the driving forces behind peptide aggregation on membranous surfaces would have impact on a number of disciplines ranging from biomaterials to biotechnology. The approaches involve an expansion of a previously developed coarse-grained model in the context of this project. The project aims to 1) study the role of peptide-lipid hydrogen bonds in peptide aggregation, 2) quantify the impact of electrostatic interactions in shaping aggregation pathways, 3) dissect the influence of multivalent ions in lipid domain formations and how this affects peptide energy landscapes and 4) characterize how changes in a membrane's physical properties can modify peptide aggregation behavior. The computational models developed in this award will be made freely available to the public.
期刊论文(4)
专著(0)
科研奖励(0)
会议论文
DOI: 10.1021/acsanm.2c00560
发表时间: 2022-05
期刊: ACS Applied Nano Materials
影响因子: 5.9
作者: [Suhas Gotla;Christopher Tong;S. Matysiak]
通讯作者: Suhas Gotla;Christopher Tong;S. Matysiak
Effects of applied surface-tension on membrane-assisted Aβ aggregation
应用表面张力对膜辅助 Aβ 聚集的影响
DOI: 10.1039/d1cp02642a
发表时间: 2021
期刊: Physical Chemistry Chemical Physics
影响因子: 3.3
作者: [Sahoo, Abhilash, Matysiak, Silvina]
通讯作者: Matysiak, Silvina
Computational insights into lipid assisted peptide misfolding and aggregation in neurodegeneration
神经退行性疾病中脂质辅助肽错误折叠和聚集的计算见解
DOI: 10.1039/c9cp02765c
发表时间: 2019
期刊: Physical Chemistry Chemical Physics
影响因子: 3.3
作者: [Sahoo, Abhilash, Matysiak, Silvina]
通讯作者: Matysiak, Silvina
Pathways of amyloid-beta absorption and aggregation in a membranous environment
膜环境中β-淀粉样蛋白吸收和聚集的途径
DOI: 10.1039/c9cp00040b
发表时间: 2019
期刊: Physical Chemistry Chemical Physics
影响因子: 3.3
作者: [Sahoo, Abhilash, Xu, Hongcheng, Matysiak, Silvina]
通讯作者: Matysiak, Silvina
Computational Studies on the Modulation of Peptide-lipid Interactions by Glycosaminoglycans
  • 批准号:
    2202281
  • 项目类别:
    Continuing Grant
  • 资助金额:
    $38.4万
  • 财政年份:
    2022
  • 负责人:
    Silvina Matysiak
  • 依托单位:
Collaborative Research: Improving protein stability with non-traditional solvents
  • 批准号:
    1760879
  • 项目类别:
    Standard Grant
  • 资助金额:
    $28.44万
  • 财政年份:
    2018
  • 负责人:
    Silvina Matysiak
  • 依托单位:
海外基金