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NSF-Simons Center for Multiscale Cell Fate Research

NSF-Simons Center for Multiscale Cell Fate Research
NSF-西蒙斯多尺度细胞命运研究中心
批准号:
1763272
负责人:
Qing Nie
金额:
$500.0万
依托单位国家:
美国
项目类别:
Continuing Grant
财政年份:
2018
资助国家:
美国
项目状态:
已结题
起止时间:
2018-07-01 至 2024-06-30

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中文摘要
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英文摘要
The NSF-Simons Center for Multiscale Cell Fate Research at the University of California, Irvine will provide a stimulating and empowering intellectual and physical environment for innovative team research at the interface between mathematics and biology. A cell's fate -- differentiation into a specific biological cell type -- is determined by several interlinked factors: cell-intrinsic mechanisms, signals from the local environment outside the cell, and messages the cell receives from other cells. Despite unprecedented amounts of experimental data at single-cell resolution, how cell fate is determined remains not fully understood. Challenges to development of a theory arise from information crosstalk at multiple temporal and spatial scales, as well as from the need to mine, integrate, and model the new single-cell "big data" derived from experimental measurements. To address these challenges and to establish a founding paradigm for multiscale cell fate research, a team of mathematical scientists and biologists will develop novel mathematical, computational, and statistical tools to analyze cell fate through a multiscale lens. The Center will carry out a coherent program for community building, interdisciplinary training and workforce development, and diversity enhancement to expand the mathematics-biology interface and to promote the convergence of mathematical and biological sciences. The Center will produce cohorts of interconnected young researchers and will nationally seed the next generation's laboratories. The knowledge gained will create new multiscale mathematics for analyzing big data and modeling complex systems, with broader applications to regenerative medicine, embryonic development, and birth defects.The NSF-Simons Center for Multiscale Cell Fate Research will establish new understanding of mechanisms and principles of cell fate control through investigation of emerging behavior of cells across scales. The study aims for transformative insight into cell fate, with a focus on three biological themes: cellular complexity and plasticity in skin, stochastic dynamics and migration of neural crest cells, and epigenetic control of stem cell specification. While each theme addresses different gaps in understanding of cell fate, they all emphasize emergent complexity arising from multiscale interactions, and they share several mathematical aspects. The Center aims to develop new mathematical methods driven by these specific cell-fate questions as well as broader biological applications. Data-driven and principle-based multiscale models of cell fate will guide experiments, with subsequent feedback to the modeling efforts. Three concerted efforts will be made to enhance overall capacity of research and training at the interface between mathematics and biology: 1) expanding mathematical sciences proximal to the biology interface, 2) connecting mathematical scientists across the spectrum, and 3) fostering mathematical scientists' ability to connect directly to experiments. A wide range of new and closely interconnected community-building and outreach programs, including community-initiated Interdisciplinary Opportunity Awards, a Convergence Accelerator Team program with national reach, a BioBridge Clinic on experimental techniques, and a Mathematical Experience through Learning Research program for high school students, will be developed and implemented to achieve the Center's ambitious goals.This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.
期刊论文(145)
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会议论文
DOI: 10.1016/j.jid.2022.06.013
发表时间: 2022-12
期刊: JOURNAL OF INVESTIGATIVE DERMATOLOGY
影响因子: 6.5
作者: [Duan, Junyan, Grando, Charles, Liu, Shuman, Chernyavsky, Alex, Chen, Jefferson K., Andersen, Bogi, Grando, Sergei A.]
通讯作者: Grando, Sergei A.
DOI: 10.1016/j.trsl.2022.11.011
发表时间: 2023-05
期刊: Translational research : the journal of laboratory and clinical medicine
影响因子: --
作者: [Hachey SJ, Sobrino A, Lee JG, Jafari MD, Klempner SJ, Puttock EJ, Edwards RA, Lowengrub JS, Waterman ML, Zell JA, Hughes CCW]
通讯作者: Hughes CCW
DOI: 10.1016/j.jid.2020.10.025
发表时间: 2021-06
期刊: The Journal of investigative dermatology
影响因子: --
作者: [Sun P, Vu R, Dragan M, Haensel D, Gutierrez G, Nguyen Q, Greenberg E, Chen Z, Wu J, Atwood S, Pearlman E, Shi Y, Han W, Kessenbrock K, Dai X]
通讯作者: Dai X
Efficient simulation of thermally fluctuating biopolymers immersed in fluids on 1-micron, 1-second scales
以 1 微米、1 秒的尺度有效模拟浸没在流体中的热波动生物聚合物
DOI: 10.1016/j.jcp.2018.12.039
发表时间: 2019
期刊: Journal of Computational Physics
影响因子: 4.1
作者: [Liu, Kai, Lowengrub, John, Allard, Jun]
通讯作者: Allard, Jun
57
    Collaborative Research: NSF Workshop on Models for Uncovering Rules and Unexpected Phenomena in Biological Systems (MODULUS)
    • 批准号:
      2232742
    • 项目类别:
      Standard Grant
    • 资助金额:
      $1.0万
    • 财政年份:
      2022
    • 负责人:
      Qing Nie
    • 依托单位:
    Collaborative Research: Early Mammalian Embryo Development: Stochastic Modeling and Experiments
    • 批准号:
      1562176
    • 项目类别:
      Continuing Grant
    • 资助金额:
      $118.12万
    • 财政年份:
      2016
    • 负责人:
      Qing Nie
    • 依托单位:
    Differentiation and Stratification during Development: A Joint Computational and Experimental Investigation
    • 批准号:
      1161621
    • 项目类别:
      Continuing Grant
    • 资助金额:
      $199.69万
    • 财政年份:
      2012
    • 负责人:
      Qing Nie
    • 依托单位:
    Computational Analysis of Morphogensis
    • 批准号:
      0917492
    • 项目类别:
      Standard Grant
    • 资助金额:
      $25.11万
    • 财政年份:
      2009
    • 负责人:
      Qing Nie
    • 依托单位:
    国内基金
    海外基金
    指数增长的Chern-Simons-Schrödinger系统驻波解的存在性与动力学分析
    • 批准号:
      2026JJ60003
    • 项目类别:
      省市级项目
    • 资助金额:
      --
    • 批准年份:
      2026
    • 负责人:
      张宁
    • 依托单位:
    Chern-Simons-Schrödinger方程中的几类变分问题
    • 批准号:
      --
    • 项目类别:
      青年科学基金项目
    • 资助金额:
      30万元
    • 批准年份:
      2022
    • 负责人:
      沈烈军
    • 依托单位:
    基于Chern-Simons规范场的几何波动方程的研究
    • 批准号:
      --
    • 项目类别:
      青年科学基金项目
    • 资助金额:
      30万元
    • 批准年份:
      2022
    • 负责人:
      金广辉
    • 依托单位:
    陈-Simons-物质理论中的可积性
    • 批准号:
      12005081
    • 项目类别:
      青年科学基金项目
    • 资助金额:
      24.0万元
    • 批准年份:
      2020
    • 负责人:
      陈辉煌
    • 依托单位: