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SCH: Blazing Data Trails: Digital Pathology and Specialist Attention

SCH: Blazing Data Trails: Digital Pathology and Specialist Attention
SCH:惊人的数据线索:数字病理学和专家关注
批准号:
2123920
负责人:
Dimitrios Samaras
金额:
$120.0万
依托单位:
依托单位国家:
美国
项目类别:
Standard Grant
财政年份:
2021
资助国家:
美国
项目状态:
未结题
起止时间:
2021-09-01 至 2025-08-31

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中文摘要
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英文摘要
When looking for cancer in clinical slides, pathologists move the focus of their attention around the slides in complex ways. These skilled shifts of attention are critical to how pathologists make expert diagnoses. This research program seeks to understand these shifts in attention in order to build an artificial intelligence (AI) system that that will be able to look at a slide the way a human pathologist would. Building an “AI expert pathologist,” however, requires a lot of data for it to learn, just like a pathologist needs years of training to become an expert. In order to provide the model with many examples of expert attention behavior, essential for it to make good predictions, the investigators will collect a large dataset of attention behavior from human pathologists. The human pathologists’ behavior will also serve as feedback to the AI model, enabling the AI system to model and reproduce how the human pathologists expertly sample the slides by moving their focus of attention. The investigators will also build AI-fueled tools that can predict where an expert would have focused their attention in a slide, thereby giving human pathologists feedback from the AI pathologist. The aim is to improve human accuracy of cancer diagnoses, which is paramount to improving the healthcare infrastructure of the country. The work also has the potential to improve histopathology training in medical personnel and to lead to next-generation AI models for cancer classification. The AI scientists trained through this project will be experts in building AI-tools that understand human expert performance and synergistically enhance it. A large database will be created of pathologist’s cursor-based movements during cancer interpretations, referred to as attention trajectories. These will be collected online from pathologists searching for metastatic cancer in Whole Slide Images (WSIs) of lymph nodes that were excised as part of cancer surgeries. For each WSI, one of four “diagnoses” will also be collected: negative, small, medium, or large metastases. Using a family of AI methods called imitation learning, the investigators will generate personalized as well as group prediction models of pathologist attention trajectories, applying Active Imitation Learning to real human behavior. Techniques for batch processing and pathologist-in-the-loop learning of attention trajectories will also be developed. An improvement in the efficiency and accuracy of pathology classification algorithms is expected through use of a multi-resolution approach that only processes small parts of WSIs by combining computational and human attention priors. Lastly, attention-based diagnostic aids that suggest areas to examine at higher magnification will be developed for human pathologists to use during slide interpretationThis award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.
期刊论文(22)
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会议论文
DOI: 10.48550/arxiv.2303.06522
发表时间: 2023-03
期刊: Information processing in medical imaging : proceedings of the ... conference
影响因子: --
作者: [Lei Zhou;Huidong Liu;Joseph Bae;Junjun He;D. Samaras;P. Prasanna]
通讯作者: Lei Zhou;Huidong Liu;Joseph Bae;Junjun He;D. Samaras;P. Prasanna
Using Generated Object Reconstructions to Study Object-based Attention
使用生成的对象重建来研究基于对象的注意力
DOI: 10.32470/ccn.2023.1685-0
发表时间: 2023
期刊:
影响因子: --
作者: [Ahn S]
通讯作者: Ahn S
Unsupervised Stain Decomposition via Inversion Regulation for Multiplex Immunohistochemistry Images
通过多重免疫组织化学图像的反转调节进行无监督染色分解
DOI: --
发表时间: 2023
期刊: Proceedings of Machine Learning Research
影响因子: --
作者: [Shahira Abousamra, Danielle Fassler]
通讯作者: Shahira Abousamra, Danielle Fassler
DOI: 10.1007/978-3-031-16434-7_19
发表时间: 2022-07
期刊: ArXiv
影响因子: --
作者: [Jingwei Zhang;Xin Zhang;Ke Ma;Rajarsi R. Gupta;J. Saltz;M. Vakalopoulou;D. Samaras]
通讯作者: Jingwei Zhang;Xin Zhang;Ke Ma;Rajarsi R. Gupta;J. Saltz;M. Vakalopoulou;D. Samaras
13
    RI: Medium: Information Super-Resolution for Very Large Images
    • 批准号:
      2212046
    • 项目类别:
      Standard Grant
    • 资助金额:
      $112.9万
    • 财政年份:
      2022
    • 负责人:
      Dimitrios Samaras
    • 依托单位:
    海外基金