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Development of simulation methods for biological supramolecular structure and function analyses

Development of simulation methods for biological supramolecular structure and function analyses
生物超分子结构和功能分析模拟方法的发展
批准号:
16087202
负责人:
KITAO Akio
金额:
$51.9万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research on Priority Areas
财政年份:
2004
资助国家:
日本
项目状态:
已结题
起止时间:
2004 至 2009

项目摘要

项目成果

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中文摘要
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英文摘要
We have developed the methods and simulation systems in which functional process of biological supramolecules is observed in silico in high resolution by using molecular simulations. We have also developed the methods to construct the structure and refine it to be energetically more stable one. In addition, we have designed the simulation methods to investigate functional mechanism more efficiently.
期刊论文(319)
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会议论文
DOI: 10.1016/j.bpj.2009.08.019
发表时间: 2009-11-04
期刊: BIOPHYSICAL JOURNAL
影响因子: 3.4
作者: [Loeffler, Hannes H., Kitao, Akio]
通讯作者: Kitao, Akio
Molecular simulation study to examine the possibility of detecting protein conformational motions by coherent neutron scattering
分子模拟研究探讨通过相干中子散射检测蛋白质构象运动的可能性
DOI: --
发表时间: 2008
期刊:
影响因子: --
作者: [Y. Joti, A. Kitao]
通讯作者: A. Kitao
Switch interactions control energy frustration and multiple flagellar filament structures.
开关相互作用控制能量挫败和多个鞭毛丝结构。
DOI: --
发表时间: 2006
期刊: Proc. Nat'l. Acad. Sci. U.S.A. 103
影响因子: --
作者: [*Kitao, A., Yonekura, K., Maki-Yonekura, S., Samatey, F.A., Imada, K., Namba, K., Go, N.]
通讯作者: N.
細菌べん毛モーター固定子複合体MotA/MotBの分子モデリング
细菌鞭毛运动定子复合物 MotA/MotB 的分子建模
DOI: --
发表时间: 2010
期刊:
影响因子: --
作者: [Hitomi Takahashi, et al., 北尾彰朗, 西原泰孝]
通讯作者: 西原泰孝
134
    Structure modeling and functional analysis of rotary motor state proteins based on mutational information
    • 批准号:
      23370066
    • 项目类别:
      Grant-in-Aid for Scientific Research (B)
    • 资助金额:
      $12.81万
    • 财政年份:
      2011
    • 负责人:
      KITAO Akio
    • 依托单位:
    Roles of hyper-anisotropic dynamics and frustration on protein function investigated in sub-msec order
    • 批准号:
      19370062
    • 项目类别:
      Grant-in-Aid for Scientific Research (B)
    • 资助金额:
      $11.65万
    • 财政年份:
      2007
    • 负责人:
      KITAO Akio
    • 依托单位:
    Underlying mechanism of bio-nano-machine investigated by massive molecular dynamics method
    • 批准号:
      15300103
    • 项目类别:
      Grant-in-Aid for Scientific Research (B)
    • 资助金额:
      $10.18万
    • 财政年份:
      2003
    • 负责人:
      KITAO Akio
    • 依托单位:
    Mechanism of the CD2/CD58 complex formation in immune system
    • 批准号:
      11680657
    • 项目类别:
      Grant-in-Aid for Scientific Research (C)
    • 资助金额:
      $2.3万
    • 财政年份:
      1999
    • 负责人:
      KITAO Akio
    • 依托单位:
    海外基金