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THE REALTION BETWEEN HETEROCHROMATIN AND W CHROMOSOME OF THE SILKWORM,BOMBYX MORI

THE REALTION BETWEEN HETEROCHROMATIN AND W CHROMOSOME OF THE SILKWORM,BOMBYX MORI
家蚕异染色质与W染色体的关系
批准号:
08456034
负责人:
OSHIKI Toshikazu
金额:
$4.93万
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (B)
财政年份:
1996
资助国家:
日本
项目状态:
已结题
起止时间:
1996 至 1998

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中文摘要
翻译
家蚕和家蚕B性染色体公式为:雌性为ZW(XY),雄性为ZZ。用700个10-mer随机引物进行聚合酶链反应(PCR),比较了家蚕(B.mori)和家蚕(B. mori)雌雄个体基因组DNA的差异。发现了4个女性特有的RAPD(W-Kabuki、W-Samurai、W-Kamikaze和W-Yamato),这4个女性特有的RAPD被认为是来自W染色体,因为其他染色体是两性共有的。计算机搜索推导的氨基酸序列,这四个RAPDs显示,所有这些都显示出同源性,以前报道的氨基酸序列编码的已知反转录转座因子从各种生物。为了进一步分析家蚕B的W染色体,我们构建了家蚕基因组DNA λ噬菌体文库,并通过PCR策略筛选出含有W-歌舞伎RAPD序列的λ噬菌体克隆。然后我们对18.1-kb DNA插入序列进行测序。基于计算机搜索,我们确定,这18.1 kb的插入DNA主要由三个反转录转座因子,一个反转录子,和一个功能未知的插入簇组成。每个元件,即非LTR逆转录转座因子BMC 1、逆转座子Bm 1、功能未知的插入DNA和新型copia样LTR逆转录转座因子Yakozuna,被插入到新型gypsy-Ty 3样LTR逆转录转座因子Kabuki中。Yokozuna含有一个长的开放阅读框架(ORE),其ORF的氨基酸序列与果蝇的copia有很强的同源性。BMC 1全长5091 bp,包含一个5 '端非翻译区、两个完整的ORF和一个终止于poly(A)尾的3'端非翻译区。在B和B中,反转录转座因子及其衍生物在W染色体上的积累可能多于常染色体或Z染色体。
英文摘要
The sex chromosome formulas of Bombyx mori and B.mandarina are ZW (XY) for the female and ZZ for the male. Genomic DNAs were compared between males and females of the silkworm, B.mori and B.mandarina by polymerase chain reaction (PCR) with 700 arbitrary 10-mer primers. Four female-specific RAPDs (W-Kabuki, W-Samurai, W-Kamikaze, and W-Yamato) were found. The four female-specific RAPDs are assumed tobe derived from the W chromosome because the other chromosomes are shared by both sexes. A computer search for deduced amino acid sequences of these four RAPDs revealed that all of them showed homology to previously reported amino acid sequences encoded in known retrotransposable elements from various organisms. To further analyze the W chromosome of B.mori we constructed a genomic DNA lambda phage library and picked the lambda phage clone containing the W-Kabuki RAPD sequence by using a PCR strategy. We then sequenced the 18.1-kb DNA inset. Based on a computer search, we determined that this 18.1-kb insertional DNA is composed primarily of clusters of three retrotransposable elements, one retroposon, and one functionally unknown insertion. Each element, namely a non-LTR retrotransposable element BMC1, a retroposon Bm1, functionally unknown inserted DNA, and a novel copia-like LTR retrotransposable element, Yakozuna, was inserted into a novel gypsy-Ty3-like LTR retrotransposable element, Kabuki. Yokozuna contains a single long open reading frame (ORE) and the whole deduced amino acid sequence of ORF reveals strong homology with copia of Drosophila. This BMC1 is 5091 bp and contains a 5'untranslated region, two intact ORFs, and 3'-UTR which terminates in a poly (A) tail. In B.mori and B.mandarina many retrotransposable elements and derivatives might be accumulated in W chromosome than in autosomes or Z chromosome.
期刊论文(29)
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会议论文
Takeshi YOKOYAMA: "Induction of hexaploid by hot water treatment of inseminated eggs in the silkworm,Bombyx mori." The Journal of Sericultural Science of Japan. 65・3. 151-156 (1996)
Takeshi YOKOYAMA:“通过热水处理家蚕受精卵诱导六倍体。”日本蚕业科学杂志 65・3(1996)。
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通讯作者:
Hajime TAKEDA: "Impaired Yolk Protein Uptake by Oocytes of a Bombyx mori Mutant" Insect Biochemistry and Molecular Biology. 26・6. 607-616 (1996)
Hajime TAKEDA:“家蚕突变体卵母细胞摄取受损”昆虫生物化学和分子生物学 26・6(1996)。
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通讯作者:
Ohbayashi et al.: "Molecular structure of the copia-like retrotransposable element Yokozuna on the W chromosome of the silkworm, Bombyx mori" Genes and Genetic Systems. Vol.73, No.6. 345-352 (1998)
Ohbayashi 等人:“家蚕 Bombyx mori W 染色体上类似 copia 的逆转录转座元件 Yokozuna 的分子结构”基因和遗传系统。
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Abe et al.: "A complete full-length non-LTR retrotransposon, BMC1, on the W chromosome of the silkworm, Bombyx mori" Genes and Genetic Systems. Vol.73, No.6. 353-358 (1998)
Abe 等人:“家蚕 Bombyx mori 的 W 染色体上的完整全长非 LTR 逆转录转座子 BMC1”基因和遗传系统。
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26
    Studies on the origin of silkworm.Bombyx mori.and an evaluation of its genetic differentiation
    Induction of the polyploid silkworms, Bombyx mori, and their cytogenetical analysis
    国内基金
    海外基金
    PHCF1调节哺乳物细胞组成型异染色质的功能和机制研究
    基于CRISPR的DNA成像技术及其在染色体高维结构研究中的应用
    • 批准号:
      31970591
    • 项目类别:
      面上项目
    • 资助金额:
      60.0万元
    • 批准年份:
      2019
    • 负责人:
      马涵慧
    • 依托单位: