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Induction and detection of retroposition of SINEs and LINEs in animal genome

Induction and detection of retroposition of SINEs and LINEs in animal genome
动物基因组中 SINE 和 LINE 逆向的诱导和检测
批准号:
13680759
负责人:
OKADA Norihiro
金额:
$2.3万
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (C)
财政年份:
2001
资助国家:
日本
项目状态:
已结题
起止时间:
2001 至 2002

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中文摘要
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英文摘要
We characterized members of the LINE (UnaL2) and SINE (UnaSINE1) families from the eel genome and found that these LINE/SINE partners share similar 3' tails. A retrotransposition assay in HeLa cells demonstrated that the 3' conserved tail of UnaL2 is necessary for its retrotransposition. This 3' tail is recognized in trans by the UnaL2 reverse transcriptase at a surprisingly high rate, and that of UnaSINE1 can also be recognized, thus providing experimental evidence that a SINE can be mobilized by the retrotransposition machinery of a partner LINE. We also demonstrated that short repeats at the 3' end of UnaL2 are required for retrotransposition suggesting that UnaL2 retrotransposes in a manner reminiscent of the reverse transcriptase activity of telomerases.
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Ikuo Ogiwara, Masaki Miya, Kazuhiko Ohshima, Norihiro Okada: "V-SINEs : A New Superfamily of Vertebrate SINEs That Are Widespread in Vertebrate Genomes and Retain a Strongly Conserved Segment within Each Repetitive Unit"Genome Research. 12. 316-324 (2001)
Ikuo Ogiwara、Masaki Miya、Kazuhiko Ohshima、Norihiro Okada:“V-SINE:一种新的脊椎动物 SINE 超家族,广泛分布于脊椎动物基因组中,并在每个重复单元内保留高度保守的片段”基因组研究。
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Ogiwara I, Miya M, Ohshima K, Okada N.: "V-SINEs : a new superfamily of vertebrate SINEs that are widespread in vertebrate genomes and retain a strongly conserved segment within each repetitive unit"Genome Res.. 12. 316-324 (2002)
Ogiwara I、Miya M、Ohshima K、Okada N.:“V-SINE:脊椎动物 SINE 的新超家族,广泛存在于脊椎动物基因组中,并在每个重复单元内保留高度保守的片段”基因组研究 12. 316-324
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Kajikawa, M., Okada, N.: "LINEs mobilize SINEs in the eel through a shared 3' sequence"Cell. 111. 433-444 (2002)
Kajikawa, M., Okada, N.:“LINEs 通过共享的 3 序列动员鳗鱼中的 SINE”细胞。
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通讯作者:
Ogiwara I, Miya M, Ohshima K, Okada N: "V-SINEs : a new superfamily of vertebrate SINEs that are widespread in vertebrate genomes and retain a strongly conserved segment within each repetitive unit"Genome Res.. 12. 316-324 (2002)
Ogiwara I、Miya M、Ohshima K、Okada N:“V-SINE:脊椎动物 SINE 的新超家族,广泛存在于脊椎动物基因组中,并在每个重复单元内保留高度保守的片段”基因组研究.. 12. 316-324(
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通讯作者:
Molecular mechanisms of speciation and macroevolution
The mechanism of adaptive radiation in cichlid fishes
  • 批准号:
    18405007
  • 项目类别:
    Grant-in-Aid for Scientific Research (B)
  • 资助金额:
    $10.48万
  • 财政年份:
    2006
  • 负责人:
    OKADA Norihiro
  • 依托单位:
Exploitation of the new method for the identification of baleen whales by using the SINE method
  • 批准号:
    12559002
  • 项目类别:
    Grant-in-Aid for Scientific Research (B)
  • 资助金额:
    $7.81万
  • 财政年份:
    2000
  • 负责人:
    OKADA Norihiro
  • 依托单位:
Moleculer Phylogenetic Study of Cichlid Fishes in Africa
  • 批准号:
    10041161
  • 项目类别:
    Grant-in-Aid for Scientific Research (B).
  • 资助金额:
    $6.27万
  • 财政年份:
    1998
  • 负责人:
    OKADA Norihiro
  • 依托单位:
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