Exploitation of the new method for the identification of baleen whales by using the SINE method
Exploitation of the new method for the identification of baleen whales by using the SINE method
批准号:
12559002
负责人:
OKADA Norihiro
金额:
$7.81万
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (B)
财政年份:
2000
资助国家:
日本
项目状态:
已结题
起止时间:
2000 至 2001
中文摘要
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英文摘要
To find the loci which are useful for species identification, we need the following procedures ; 1) Screening the genomic libraries of cetaceans 2) Sequencing of SINE flanking region 3) Designing the oligonucleotide primers that can amplify the SINE locus 4) Performing the PCRs by using the genomic DNAs of several cetacean species as templates 5) Find the loci to which SINEs are inserted species specifically. In this research, we have characterized several loci, which is useful for species identification of baleen whales. They are the followings, Baleen whales specific ; Hump 20, Hump 203, Hump 9. Hump 14, Hump 30, Hump 34, Hump 52, Hump 55, Fin 6, Fin 11, Fin 17, Sei 8-2, Sei 10-1, Sei 24, Sei 25, Sei 29-2, Mnk 15, Mnk 25, Nag 13, Nag 23, BRY 15, BRY 18, BRY 27, BRY 44, BRY 48, BRY 50, BRY 54, Blu 2, Blu 7, Blu 22, Blu 27, Blu 78. Fin whale specific ; Finl7, Fin 18, Nag 18. Humpback whale specific; Hump 13, Hump33, Hump 42, Hump 57, Fin 9. Bryde's whale specific ; BRY 63. Minke whale specific ; Mnk 1, Mnk 30, Mnk 31, NM 35, SMK 34, KIT 90. Concerning the cetaceans for which the species identification is not available now, we continue the further experiments.
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Nikaido M, Matsuno F, Hamilton H, Brownell RL Jr, Cao Y, Ding W, Zuoyan Z, Shedlock AM, Fordyce RE, Hasegawa M, Okada N.: "Retroposon analysis of major cetacean lineages : the monophyly of toothed whales and the paraphyly of river dolphins"Proc Natl Acad
Nikaido M、Matsuno F、Hamilton H、Brownell RL Jr、Cao Y、Ding W、Zuoyan Z、Shedlock AM、Fordyce RE、Hasekawa M、Okada N.:“主要鲸目动物谱系的逆座子分析:齿鲸的单系性和
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Nikaido M, Matsuno F, Hamilton H, Brownell RL Jr, Cao Y, Ding W, Zuoyan Z, Shedlock AM, Fordyce RE, Hasegawa M, Okada N.: "Retroposon analysis of major cetacean lineages: the monophyly of toothed whales and the paraphyly of river dolphins."Proc Natl Acad
Nikaido M、Matsuno F、Hamilton H、Brownell RL Jr、Cao Y、Ding W、Zuoyan Z、Shedlock AM、Fordyce RE、Hasekawa M、Okada N.:“主要鲸类谱系的逆座子分析:齿鲸的单系性和
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作者:
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通讯作者:
Nikaido M, Matsuno F, Hamilton H, Brownell RL Jr, Cao Y, Ding W, Zuoyan Z, Shedlock AM, Fordyce RE, Hasegawa M, Okada N: "Retroposon analysis of major cetacean lineages: the monophyly of toothed whales and the paraphyly of river dolphins"Proc Natl Acad Sc
Nikaido M、Matsuno F、Hamilton H、Brownell RL Jr、Cao Y、Ding W、Zuoyan Z、Shedlock AM、Fordyce RE、Hasekawa M、Okada N:“主要鲸类谱系的逆座子分析:齿鲸的单系性和并系性
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Nikaido M, Matsuno F, Abe H, Shimamura M, Hamilton H, Matsubayashi H, Okada N.: "Evolution of CHR-2 SINEs in cetartiodactyl genomes : possible evidence for the monophyletic origin of toothed whales"Mamm Genome. 12. 909-915 (2001)
Nikaido M、Matsuno F、Abe H、Shimamura M、Hamilton H、Matsubayashi H、Okada N.:“鲸齿鲸基因组中 CHR-2 SINE 的进化:齿鲸单系起源的可能证据”Mamm 基因组。
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通讯作者:
Nikaido M, Matsuno F, Abe H, Shimamura M, Hamilton H, Matsubayashi H, Okada N: "Evolution of CHR-2 SINEs in cetartiodactyl genomes possible evidence for the monophyletic origin of toothed whales"Mamm Genome. 12. 909-915 (2001)
Nikaido M、Matsuno F、Abe H、Shimamura M、Hamilton H、Matsubayashi H、Okada N:“鲸齿鲸基因组中 CHR-2 SINE 的进化可能是齿鲸单系起源的证据”Mamm 基因组。
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Molecular mechanisms of speciation and macroevolution
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批准号:21227002
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项目类别:Grant-in-Aid for Scientific Research (S)
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资助金额:$94.68万
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负责人:OKADA Norihiro
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依托单位:
The mechanism of adaptive radiation in cichlid fishes
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$10.48万
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负责人:OKADA Norihiro
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依托单位:
Induction and detection of retroposition of SINEs and LINEs in animal genome
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批准号:13680759
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项目类别:Grant-in-Aid for Scientific Research (C)
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资助金额:$2.3万
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依托单位:
Moleculer Phylogenetic Study of Cichlid Fishes in Africa
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批准号:10041161
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项目类别:Grant-in-Aid for Scientific Research (B).
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资助金额:$6.27万
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财政年份:1998
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负责人:OKADA Norihiro
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依托单位:
Development of method for identification of whale species using transposable elements
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批准号:09559004
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$8.51万
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依托单位:
Molecular mechanism of the diversification of genome by retroposons
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批准号:08408030
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项目类别:Grant-in-Aid for Scientific Research (A)
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资助金额:$6.59万
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依托单位:
Molecular Studies on Evolution of Salmonid Populations
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批准号:05041085
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项目类别:Grant-in-Aid for international Scientific Research
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资助金额:$1.28万
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负责人:OKADA Norihiro
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依托单位:
Origin and Evolution of RNA
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批准号:04272101
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项目类别:Grant-in-Aid for Scientific Research on Priority Areas
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资助金额:$53.44万
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财政年份:1992
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负责人:OKADA Norihiro
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依托单位:
国内基金
海外基金
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