Discovery of two novelproteinases andtheirbi rl emical resemph
Discovery of two novelproteinases andtheirbi rl emical resemph
批准号:
18380068
负责人:
HIRAGA Kazumi
金额:
$9.38万
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (B)
财政年份:
2006
资助国家:
日本
项目状态:
已结题
起止时间:
2006 至 2007
中文摘要
Sedolisin:1)CLN2亚基的结构分析:设计合成了组合底物文库,亚基分析正在进行中。2)CLN_2的结构分析:研究了CLN_2的表达和纯化方法,建立了一种高效的CLN_2纯化方法。Eqolisin家族:1)反应机理的阐明:结构分析推测的催化残基Glu136和G1n53转变为Ala,其反应动力学表明这些残基为催化残基。在利用组合文库对底物特异性进行详细分析的基础上,开发了合成抑制剂(Y.Kataoka等人:FEBSE Letters,579,2991-2994(2005))。此外,还制备了酶-抑制剂复合体,结构分析的结果揭示了反应机理(B.Pillai,et.J.Mol Biol 365,343-361(2007))。2)自然界分布:未完成。3)开发安全的农用化学品:相继开发出抑制常数在亚纳米摩尔水平的多肽抑制剂。该抑制剂对植物病原微生物的效果将在实验室规模上确定。
英文摘要
Sedolisin : 1) Structural analysis of CLN2 subsite : Combinatorial substrate library was designed and synthesized, and subsite-analysis is underway. 2) structure analysis of CLN2 : Procedures for expression and purification were investigated and an extremely efficient purification method was constructed. Large amount of CLN2 was prepared and the crystallization of CLN2 is undergoing.Eqolisin family: 1) Elucidation of reaction mechanism: Glu136 and G1n53, presumed catalytic residues by structural analysis, were changed to Ala and their reaction kinetics revealed that these residues were the catalytic resideues. Based on the detailed analysis for substrate specificity using combinatorial library, synthetic inhibitor was developed (Y. Kataoka et al: FEBSE Letters, 579, 2991-2994 (2005)). Furthermore, enzyme-inhibitor complex was prepared and the obtained results from the structural analysis revealed the reaction mechanism (B. Pillai, et. al.: J. Mol Biol 365, 343-361 (2007)). 2) Distribution in nature: not completed. 3) Development of safety agrichemicals: Peptide inhibitors having inhibitory constant at subnano-molar-level were successively developed. The effect of the inhibitor for phytopathogenic microbials will be determined at lab scale.
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DOI:
10.1111/j.1742-4658.2006.05266.x
发表时间:
2006-06-01
期刊:
FEBS JOURNAL
影响因子:
5.4
作者:
[Okubo, Ayumi, Li, Mi, Nakayama, Toru]
通讯作者:
Nakayama, Toru
DOI:
10.1016/j.bbapap.2005.12.010
发表时间:
2006-03
期刊:
Biochimica et biophysica acta
影响因子:
--
作者:
[Y. Fujimoto;H. Ikeuchi;T. Tada;H. Oyama;K. Oda;S. Kunugi]
通讯作者:
Y. Fujimoto;H. Ikeuchi;T. Tada;H. Oyama;K. Oda;S. Kunugi
Synergetic effects of pressure and chemical denaturant an protein unfolding : stability of a serine-type carboxyl protease, kumamolisin
压力和化学变性剂对蛋白质展开的协同作用:丝氨酸型羧基蛋白酶 kumamolisin 的稳定性
DOI:
--
发表时间:
2006
期刊:
Biochim.Biophys.Acta 1764
影响因子:
--
作者:
[Yasunori Fujimoto, 他5名]
通讯作者:
他5名
Crystal structure of Scytalidoglutamic peptidase with its first potent inhibitor provides insights into substrate specificity and catalysis.
Scytalidoglutamic 肽酶及其第一个有效抑制剂的晶体结构提供了对底物特异性和催化作用的深入了解。
DOI:
--
发表时间:
2007
期刊:
J. Mol. Biol. 365
影响因子:
--
作者:
[B. Pillai, 他5名]
通讯作者:
他5名
Processing, catalytic activity and crystal structures of kumolisin-As with an engineered active site
具有工程活性位点的库莫里辛-As的加工、催化活性和晶体结构
DOI:
--
发表时间:
2006
期刊:
FEBS-Journal 273
影响因子:
--
作者:
[A., Okubo, Mi, Li, M., Ashida, H., Oyama, A., Gustchina, K., Oda, B. M., Dunn, A., Wlodawer, T., Nakayama]
通讯作者:
Nakayama
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