Improved diagnostic sensitivity for rapid COVID-19 testing using Enhanced Preservation Media
Improved diagnostic sensitivity for rapid COVID-19 testing using Enhanced Preservation Media
批准号:
10203669
负责人:
Trevor Levin
金额:
$100.0万
依托单位国家:
美国
项目类别:
财政年份:
2016
资助国家:
美国
项目状态:
已结题
起止时间:
2016-09-01 至 2022-05-31
关键词:
2019-nCoVAddressBackBuffersCLIA certifiedCOVID-19Cancer PatientCaregiversCaringCenters for Disease Control and Prevention (U.S.)Cessation of lifeClinicalCollaborationsCommunicable DiseasesCommunitiesCritical CareDataDeath RateDetectionDevicesDiagnostic SensitivityEligibility DeterminationEmergency SituationEnzymesEquipmentFDA approvedFaceFamilyFundingGenomicsGoalsGoldHealth PersonnelHigh-Risk CancerHome environmentHospitalsHuman ResourcesIndividualInfrastructureMalignant neoplasm of lungMasksMeasuresMedicalNoseNucleic Acid Amplification TestsNucleic AcidsOperative Surgical ProceduresOutcomePatientsPerformancePoint-of-Care SystemsPopulationProblem SolvingProcessProtocols documentationPublic HealthRNARadiation therapyReagentRecommendationReportingResearchReverse Transcriptase Polymerase Chain ReactionRiskRunningSamplingSelf AdministrationShelter facilityShippingSignal TransductionSourceSpecimenStressSupervisionSwabSystemTechnologyTemperatureTest ResultTestingTransportationUnited StatesValidationViralViral Load resultVirusVirus InactivationVulnerable Populationsbasecancer radiation therapycancer surgerycancer therapycare providerschemoradiationcohortcomparativedemographicsexperienceimprovedin vitro testinginfection burdeninstrumentnovel strategiesoperationpatient populationperformance testspoint of carepreservationpreventsample collectionscreeningsecondary infectionsimulationviral RNA
中文摘要
项目摘要
COVID-19仍然是一个全球紧急情况。随着国家和经济试图重新开放,
病毒传播和死亡率继续上升,特别是在许多大城市中心,
在美国,收容所的订单并没有充分减少感染负担。
继续改善SARS-CoV-2检测基础设施和检测性能是当务之急
needed.据报道,假阴性检测率为30- 50%,这意味着每10
COVID-19阳性患者检测,3至5人将获得不准确的阴性结果。这些虚假
目前使用的所有检测平台均出现阴性率,
几乎不可能虽然测试系统本身的技术在技术上是
非常敏感,大部分损失的灵敏度出现在测试过程的早期,
收集、运输和RNA提取。
全球高假阴性检测结果率-使用最好的检测试剂盒和方案-
继续产生的两个主要来源:第一,样本没有很好地保存在CDC认可的
病毒转运培养基/通用转运培养基(VTM/UTM)或其他转运培养基,
由于保存不佳,导致10- 100倍的信号损失;第二,剩余的
然后在提取过程中将样品进一步稀释至原始浓度的0.25
在进入测试之前。除非这些基本的测试问题得到解决,否则
如果没有解决方案,高假阴性检测结果将使病毒传播继续上升。在
为了解决这一未满足的需求,Convergent Genomics开发了增强保存技术,
Media™是一种通用的样本运输和集成提取解决方案,
提高测试性能。
增强型保存介质(Enhanced Preservation Media,简称EMPT)可实现以下测试改进:
专为与全球范围内的床旁或集中PCR检测无缝集成而构建;
将获得FDA批准,成为第一个集成稳定和提取保存介质
用于SARS-CoV-2;和将与领先的研究中心进行临床验证,
扩大SARS-CoV-2的社区监测测试。我们专有的缓冲区保护免费
核酸通过多种机制,破坏病毒以保护检测人员,
整个样品的简单、高通量提取。体外试验表明,
该平台的功能,以显着提高测试性能,在最具挑战性的
低病毒载量样本。
英文摘要
Project Summary
COVID-19 continues to be a global emergency. As nations and economies attempt to reopen, the
rate of viral spread and deaths continues to rise, particularly in many large urban centers within
the United States, where shelter in place orders did not sufficiently reduce infection burden.
Continued improvement in SARS-CoV-2 testing infrastructure and test performance are urgently
needed. False negative testing rates have been reported at 30-50%, meaning that for every 10
COVID-19 positive patients tested, 3 to 5 will receive an inaccurate negative result. These false
negative rates occur with all testing platforms currently used, making control of viral spread
nearly impossible. While the technology underlying the test systems themselves are technically
very sensitive, much of the lost sensitivity arises earlier in the test process during sample
collection, transportation, and RNA extraction.
Global rates of high false negative test results – using the best test kits and protocols –
continue to arise from two major sources: First, samples are not well preserved in CDC endorsed
Viral Transport Media/Universal Transport Media (VTM/UTM) or other transport medias,
leading to a 10-100x signal loss as a consequence of poor preservation; Second, the remaining
sample is then further diluted often to 0.25% of the original concentration during extraction
before going into the test. Until these fundamental testing problems are solved, and with no other
solutions available, high false negative test results will allow viral spread to continue rising. In
order to address this unmet need, Convergent Genomics has developed Enhanced Preservation
Media™, a universal specimen transportation and integrated extraction solution, to significantly
improve testing performance.
Enhanced Preservation Media (EPM) enables the following testing improvements: EPM
is built for seamless integration with point-of-care or centralized PCR tests world-wide; EPM
will achieve FDA approval as the first integrated stabilization and extraction preservation media
for SARS-CoV-2; and EPM will be clinically validated with leading research centers for
expanded community surveillance testing of SARS-CoV-2. Our proprietary buffer protects free
nucleic acids by multiple mechanisms, destroys virus to protect testing personnel, and facilitates
simple, high-throughput extraction of entire samples. In vitro testing has demonstrated the
capabilities of this platform to significantly improve testing performance in the most challenging
low viral load samples.
期刊论文(3)
专著(0)
科研奖励(0)
会议论文
DOI:
10.1158/1078-0432.ccr-23-0570
发表时间:
2023-09-15
期刊:
Clinical cancer research : an official journal of the American Association for Cancer Research
影响因子:
--
作者:
[]
通讯作者:
DOI:
10.3390/jcm11195827
发表时间:
2022-09-30
期刊:
Journal of clinical medicine
影响因子:
3.9
作者:
[Bicocca VT, Phillips KG, Fischer DS, Caruso VM, Goudarzi M, Garcia-Ransom M, Lentz PS, MacBride AR, Jensen BW, Mazzarella BC, Koppie T, Korkola JE, Gray JW, Levin TG]
通讯作者:
Levin TG
SBIR grant application to develop and commercialize a urine based medical diagnostic for the detection of bladder cancer recurrence.
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批准号:9502460
-
项目类别:
-
资助金额:$68.69万
-
财政年份:2016
-
负责人:Trevor Levin
-
依托单位:
Expanded Clinical Validation & Commercial Launch of the UriSeq Platform for Bladder Cancer
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批准号:10200688
-
项目类别:
-
资助金额:$163.55万
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财政年份:2016
-
负责人:Trevor Levin
-
依托单位:
海外基金