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A Leukemia Cell-Specific Coiled-Coil Protein for Treatment of Chronic Myeloid Leukemia

用于治疗慢性粒细胞白血病的白血病细胞特异性卷曲螺旋蛋白

基本信息

批准号：
10319608
负责人：
Carol S. Lim
金额：
$ 34.19万
依托单位：
UNIVERSITY OF UTAH
依托单位国家：
美国
项目类别：
财政年份：
2021
资助国家：
美国
起止时间：
2021-01-01 至 2025-12-31
项目状态：
未结题

来源：
https://reporter.nih.gov/project-details/10319608
关键词：
Acute Lymphocytic Leukemia Affinity Amino Acids Apoptosis Apoptotic Area Bcr-Abl tyrosine kinase Binding Biology Blood Circulation Bypass Cell Line Cell physiology Cells Charge Chemicals Chromosomal translocation Chromosome abnormality Chronic Myeloid Leukemia Clinical Clinical Trials Collaborations Combination Drug Therapy Combined Modality Therapy Computer Models Dimerization Disease Drug resistance Event Experimental Leukemia Genes Genetic Diseases Goals Growth Heterodimerization Homo Homodimerization Hydrophobicity Individual Inflammatory Intravenous Lead Length Leukemic Cell Ligation Location Malignant Neoplasms Mediating Modeling Oncogenic Pain Patients Peptide Synthesis Peptides Permeability Phase Phosphotransferases Physiological Processes Production Protein Tyrosine Kinase Proteins Proteolysis Research Personnel Resistance Sampling Serum Shapes Signal Transduction Solid Specificity Technology Tertiary Protein Structure Testing Therapeutic Therapeutic Intervention Translations Tyrosine Kinase Inhibitor Variant Viral cell killing chronic myeloid leukemia cell clinically relevant design dimer drug discovery improved in vitro testing in vivo inhibitor leukemia mouse model mutant mutational status new technology novel novel therapeutic intervention pre-clinical protein oligomer resistance mutation solid state standard of care stapled peptide success targeted agent targeted treatment therapeutic protein tumorigenesis

项目摘要

Project Summary/Abstract The long-term goals of this proposal are to explore the protein dimerization interface as an area for therapeutic intervention. Protein dimerization/oligomerization is a recurring theme in biology representing the mechanism by which hundreds of proteins regulate key cellular processes such as enzymatic activity and signal transduction. This non-covalent protein homo- or heterodimerization is mediated by hydrophobicity and both shape and charge complementarity. Once thought to be undruggable, dimer interfaces are emerging as an area for powerful therapeutic intervention for inflammatory diseases, pain, genetic diseases, cancer, and other diseases. The goal of this proposal is to develop a clinically relevant small protein dimerization inhibitor. As a model, we will use our dimerization coiled-coil (cc) inhibitor of Bcr-Abl. Bcr-Abl is an example of a protein that must dimerize to enable its oncogenic activity. Bcr-Abl, results from an abnormal chromosomal translocation, manifests as a constitutively active tyrosine kinase and causes of 95% of chronic myeloid leukemias (CML). We build on our novel, computationally designed Bcr coiled-coil mutant (ccmut) that selectively dimerizes with Bcr-Abl and inhibits its activity. When virally delivered as a gene, ccmut is effective against wild-type and mutant forms of Bcr-Abl. Our ccmut specifically favors heterodimerization with Bcr-Abl to disrupt Bcr-Abl dimerization, a necessary step for oncogenesis, and thus represents a novel therapeutic strategy. We have also fused ccmut to a non-toxic cell- penetrating peptide with known leukemia cell specificity and showed that it disrupts Bcr-Abl dimerization and enters and kills leukemia cells. For this proposal, we will explore peptide stapling technologies (to increase proteolytic stability) and native chemical ligation to synthesize 2 shorter stapled peptides into a longer therapeutic protein domain. We will first computationally model possible staple locations that maintain target affinity. These stapled versions (CPP-St-ccmut) are predicted to enter cells, resist serum proteolysis, bind to Bcr-Abl and inhibit its activity. We will then test the activity of our constructs with and without TKI ponatinib to test “multidomain targeting” of Bcr-Abl in CML cell lines, CML patient samples, and a CML animal model. Aims are as follows: Aim 1: Computationally design and synthesize with solid state peptide synthesis and native chemical ligation, a leukemia-specific, stapled cc inhibitor (CPP-St-ccmut) against Bc-Abl. Aim 2: Determine cell internalization, binding, and apoptotic ability of CPP-St-ccmut candidates in leukemic cell lines including those with clinically relevant mutations that are resistant to TKIs, and cells derived from patient samples, alone and in combination with ponatinib. Aim 3: Demonstrate efficacy of CPP-St-ccmut with and without ponatinib in a simple, pre-clinical mouse model of CML (syngeneic mouse model using intravenously injected BaF/3 cells expressing drug- resistant Bcr-Abl variants, including compound mutants). Our goal is to develop a stapled protein domain targeting the protein-protein dimerization interface Bcr-Abl kinase.

项目总结/摘要该提案的长期目标是探索蛋白质二聚化界面作为治疗性疾病的领域。干预蛋白质二聚化/寡聚化是生物学中反复出现的主题，代表了蛋白质二聚化/寡聚化的机制。数百种蛋白质通过其调节关键的细胞过程，如酶活性和信号转导。这种非共价蛋白质同源或异源二聚化是由疏水性以及形状和电荷介导的互补性二聚体接口曾经被认为是不可用的，现在正成为一个强大的炎症性疾病、疼痛、遗传性疾病、癌症和其他疾病的治疗干预。目标该提案的一个重要目的是开发一种临床相关的小蛋白二聚化抑制剂。作为模型，我们将使用我们的Bcr-Abl的二聚化卷曲螺旋（cc）抑制剂Bcr-Abl是必须二聚化以使其具有致癌活性。Bcr-Abl是由异常染色体易位引起的，表现为一种组成性活性酪氨酸激酶和95%的慢性髓性白血病（CML）的原因。我们建立在一种新的计算设计的Bcr卷曲螺旋突变体（ccmut），它选择性地与Bcr-Abl二聚化，并抑制其活动。当作为基因病毒递送时，ccmut对野生型和突变型Bcr-Abl有效。我们的ccmut特别有利于与Bcr-Abl异源二聚化，以破坏Bcr-Abl二聚化，这是Bcr-Abl二聚化的必要步骤。肿瘤发生，因此代表了一种新的治疗策略。我们还把ccmut和无毒细胞融合在一起- 具有已知白血病细胞特异性的穿透肽，并显示其破坏Bcr-Abl二聚化，进入并杀死白血病细胞对于这项提案，我们将探索肽钉合技术（以增加蛋白水解稳定性）和天然化学连接以将2个较短的钉合肽合成为较长的治疗肽蛋白质结构域我们将首先计算模型可能的吻合位置，保持目标的亲和力。这些预期钉合形式（CPP-St-ccmut）进入细胞，抵抗血清蛋白水解，结合Bcr-Abl并抑制Bcr-Abl的表达。其活动。然后，我们将测试我们的构建体在有和没有TKI泊那替尼的情况下的活性，以测试“多结构域在CML细胞系、CML患者样品和CML动物模型中Bcr-Abl的“靶向”。目标如下： 1：计算设计和合成与固态肽合成和天然化学连接，a 针对Bc-Abl白血病特异性钉合α抑制剂（CPP-St-ccmut）目的2：测定细胞内化， CPP-St-ccmut候选物在白血病细胞系中的结合和凋亡能力，对TKI耐药的相关突变，以及源自患者样本的细胞，单独或联合使用关于Ponatinib目的3：在简单的临床前试验中证明CPP-St-ccmut在联合和不联合泊那替尼的情况下的疗效 CML的小鼠模型（使用静脉内注射的表达药物的BaF/3细胞的同基因小鼠模型，抗性Bcr-Abl变体，包括复合突变体）。我们的目标是开发一种钉合蛋白结构域靶向蛋白质-蛋白质二聚化界面Bcr-Abl激酶。