Role of cleaved H3 as a key epigenetic regulator of macrophages in idiopathic pulmonary fibrosis
Role of cleaved H3 as a key epigenetic regulator of macrophages in idiopathic pulmonary fibrosis
批准号:
10410347
负责人:
Madeleine Scott
金额:
$3.84万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2020
资助国家:
美国
项目状态:
已结题
起止时间:
2020-06-14 至 2022-06-13
关键词:
AddressAffectAgeBiochemical GeneticsCRISPR screenCRISPR/Cas technologyCell CommunicationCell Differentiation processCell LineCellsChIP-seqChromatinCicatrixCleaved cellCollagenCytometryDNA SequenceDataDepositionDiagnosisDiseaseDisease ProgressionEnvironmental Risk FactorEpigenetic ProcessEtiologyFunctional disorderGene ExpressionGene Expression ProfileGenesGenetic TranscriptionHistone H3HistonesHomeostasisIncidenceIndividualInterstitial Lung DiseasesKnock-outKnowledgeLengthLibrariesLungLung TransplantationLung diseasesMeasuresMediatingMetalsMyelogenousNormal CellPathogenesisPatientsPeptide HydrolasesPersonsPopulationPrevalenceProteinsPulmonary FibrosisRoleStructure of parenchyma of lungTechniquesTechnologyThreonineTimeTissuesUnited StatesWorkantibody conjugatebasecell typecurative treatmentsdifferential expressioneffective therapyexperimental studygenetic signaturehistone modificationidiopathic pulmonary fibrosismacrophageoverexpressionresponsesingle-cell RNA sequencingtobacco controltobacco etch virustooltranscriptometranscriptome sequencingtranscriptomicswound healing
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Project Summary
Idiopathic pulmonary fibrosis (IPF) is a progressive interstitial lung disease with a median survival of 2-5 years.
The incidence of IPF increases with age, thus IPF will affect more individuals as the population continues to grow
older. There is no effective treatment for IPF except lung transplantation. Our current understanding of IPF
suggests that pathogenesis begins when environmental factors alter normal lung homeostasis in a genetically
or epigenetically susceptible individual. This altered state disrupts normal cell communication and induces a
wound healing response, ultimately leading to irreversible fibrosis of the lung parenchyma. Although the exact
etiology of IPF is unknown, pro-fibrotic macrophages have been implicated in disease pathogenesis. Preliminary
data suggests that patients with IPF have a population of disease-specific macrophages. This proposal aims to
elucidate the role of specific histone modifications on disease-specific macrophage transcriptome in IPF. Aim 1
combines biochemical and genetic tools to identify the targets and regulators of histone modifications in IPF-
specific macrophages. Aim 2 will evaluate the transcriptional changes directly caused by presence or absence
of a histone modification in macrophages. These experiments will elucidate a mechanism of macrophage
dysfunction with direct translational implications for patients with IPF.
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