Indiana Genomics Research Training Program for Data Scientists (INGEN4DS)

印第安纳州数据科学家基因组学研究培训计划 (INGEN4DS)

• 批准号: 10410773
• 负责人: Kun Huang
• 金额: $ 25.7万
• 依托单位: INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS
• 依托单位国家: 美国
• 财政年份: 2022
• 资助国家: 美国
• 起止时间: 2022-08-10 至 2027-05-31
• 项目状态: 未结题
• 来源: https://reporter.nih.gov/project-details/10410773
• 关键词: Academia; Address; Admission activity; Area; Bioinformatics; Biomedical Research; Career Choice; Communication; Communities; Computational Biology; Consultations; Data Analyses; Data Science; Data Scientist; Degree program; Development; Development Plans; Doctor of Philosophy; Doctor' s Degree; Employment; Enrollment; Ethnic group; Faculty; Funding; Genomics; Goals; Graduate Education; Health; Healthcare; Human; Indiana; Individual; Industry; Institution; Knowledge; Laboratories; Learning; Letters; Malignant Neoplasms; Master' s Degree; Mentors; Mentorship; Methodology; Needs Assessment; Oral; Paper; Population Group; Publications; Publishing; Readiness; Recommendation; Reporting; Reproducibility; Research; Research Ethics; Research Project Grants; Research Training; Rotation; STEM field; Safety; Schools; Science; Scientist; Secure; Series; Students; Supervision; Talents; Training; Training Programs; Travel; Underrepresented Populations; Underserved Population; United States National Institutes of Health; Universities; Writing; base; career; career development; cohort; college; computing resources; design; disability; educational atmosphere; expectation; experience; faculty mentor; falls; genomic data; hands on research; improved; innovation; interest; member; posters; programs; public trust; rare genetic disorder; recruit; responsible research conduct; science education; skills; social; success; symposium; undergraduate student; underrepresented minority student

INGEN4DS Project Summary The Indiana Genomics Research Training Program for Data Scientists (INGEN4DS) will provide practical training and hands-on research experience in genomics data analysis to prepare and encourage a diverse pool of talented data science master’s degree students to enter the genomics workforce. As many as eight students will be recruited annually from master’s degree data science programs at two research-intensive Indiana University campuses, Indiana University Purdue University Indianapolis (IUPUI), and Indiana University Bloomington (IUB). Each year, a diverse cohort of underrepresented INGEN4DS scholars will begin the program in the first week of June with a one-week orientation where the scholars will begin building a sense of community amongst themselves through social activities; receive training in laboratory safety, responsible conduct of research, and ethics in genomics research; and attend a poster session to meet the faculty mentors and learn about available research projects. Weeks 2-7 will consist of two-week rotations in three labs chosen by the scholar. Each scholar will then be paired with an interdisciplinary co-mentorship team, consisting of one faculty member in the biomedical sciences who will be responsible for providing a genomics dataset and one faculty member in computational biology who will supervise the bioinformatics analysis. The scholar, under the guidance of the mentors, will develop an appropriate research plan involving genomics data analysis that can be completed within ten months and have a high likelihood of contributing to a publication. Following a needs assessment, individual development plans (IDP) will be prepared by each scholar in consultation with program advisors and the co-mentor team to guide the scholar’s training program. The IDP will be reviewed monthly to assess the scholar’s progress toward their program goals. Professional enrichment activities include practice in scientific writing and both oral and poster presentations. A seminar series featuring invited speakers from academia, industry, and healthcare institutions will highlight possible career opportunities in genomics data science. INGEN4DS scholars will receive stipends for their research efforts during the summer (40 hrs/week), fall and spring semesters (15 hrs/week), and travel funds to attend one scientific conference to present their findings. Additionally, the scholars will receive ongoing support including individualized advising, career development, and assistance in preparing resumes and applications. In the final month of the program, scholars will prepare a written report and a short oral presentation of their findings. Our expectation is that over 75% of the scholars will secure employment in the genomics workforce or be accepted to a PhD program in Bioinformatics or a Genomics field. Further, we expect that the scholars will have gained real-world experience in large-scale genomics data analysis using advanced data sciences methodology and computing resources and will have achieved effective communication skills necessary for working in interdisciplinary genomics research groups.

INGEN 4DS项目摘要 印第安纳州基因组学研究数据科学家培训计划（INGEN 4DS）将提供实用的 在基因组学数据分析方面的培训和实践研究经验，以准备和鼓励多样化的人才库 有才华的数据科学硕士学位的学生进入基因组学的劳动力。多达8名学生 将每年从两个研究密集型的印第安纳州的硕士学位数据科学项目中招募 大学校园，印第安纳州普渡大学印第安纳波利斯（IUPUI）和印第安纳州大学 布卢明顿（IUB）。每年，一个代表性不足的INGEN 4DS学者的多元化队列将开始 计划在六月的第一个星期与为期一周的方向，学者将开始建立一种感觉， 通过社交活动进行社区活动;接受实验室安全培训，负责任 进行研究，并在基因组学研究的道德;并参加海报会议，以满足教师导师 并了解可用的研究项目。第2-7周将包括在三个选定的实验室进行为期两周的轮换 的学者。每位学者将与一个跨学科的共同导师团队配对， 生物医学科学的教员，负责提供基因组学数据集和一个 在计算生物学的教员谁将监督生物信息学分析。学者，在 在导师的指导下，将制定一个适当的研究计划，涉及基因组学数据分析， 在十个月内完成，并有很大的可能性有助于出版。A需要 评估，个人发展计划（IDP）将由每个学者与计划协商准备 顾问和共同导师团队指导学者的培训计划。将每月审查国内流离失所者方案， 评估学者对他们的计划目标的进展。专业充实活动包括实践 科学写作以及口头和海报展示。一系列研讨会邀请了来自 学术界、工业界和医疗保健机构将重点介绍基因组学数据方面可能的职业机会 科学INGEN 4DS学者将在夏季（40小时/周）获得研究工作津贴， 秋季和春季学期（15小时/周），以及参加一次科学会议以展示其 调查结果。此外，学者将获得持续的支持，包括个性化咨询，职业生涯 发展，并协助准备简历和申请。在项目的最后一个月， 学者们将准备一份书面报告和一个简短的口头报告，介绍他们的发现。我们的期望是， 75%的学者将在基因组学工作中获得就业机会，或被接受攻读博士学位。 生物信息学或基因组学领域。此外，我们预计，学者们将获得现实世界的经验， 使用先进的数据科学方法和计算资源进行大规模基因组学数据分析 并将获得跨学科基因组学工作所需的有效沟通技能 研究团体。