Causal machine learning methods for studying the effects of environmental exposures on childhood cancer using natural experiments

使用自然实验研究环境暴露对儿童癌症影响的因果机器学习方法

• 批准号: 10549353
• 负责人: Rachel C Nethery
• 金额: $ 13.91万
• 依托单位: HARVARD SCHOOL OF PUBLIC HEALTH
• 依托单位国家: 美国
• 财政年份: 2021
• 资助国家: 美国
• 起止时间: 2021-02-01 至 2025-01-31
• 项目状态: 未结题
• 来源: https://reporter.nih.gov/project-details/10549353
• 关键词: 1,3-Butadiene; Accounting; Address; Adult; Affect; Air; Area; Award; Bayesian learning; Benzene; Biological; Biology; Cancer Biology; Case/Control Studies; Cellular biology; Chemicals; Child; Child Health; Childhood Leukemia; Code; Cohort Studies; Communities; Computer software; DNA Sequence Alteration; Data; Data Science; Developed Countries; Development; Discipline; Educational workshop; Ensure; Environment; Environmental Exposure; Environmental Health; Epidemiology; Event; Exposure to; Foundations; Funding; Gasoline; Goals; Health; Heterogeneity; Home; Incidence; Investigation; Knowledge; Learning; Literature; Machine Learning; Malignant Childhood Neoplasm; Measures; Medical; Mentors; Mentorship; Methodology; Methods; Modeling; Natural experiment; Occupational Exposure; Outcome; Pediatric Oncology; Play; Positioning Attribute; Predisposition; Process; Proliferating; Regulation; Reproducibility; Research; Research Design; Resources; Risk Factors; Role; Science; Series; Social Sciences; Societies; Source; Time; Time trend; Training; United States Environmental Protection Agency; Work; cancer epidemiology; career development; case control; cohort; educational atmosphere; environmental agent; epidemiology study; exhaust; experience; experimental analysis; health application; health data; innovation; insight; knowledge integration; leukemia; machine learning method; machine learning model; mortality; neoplasm registry; open source; postnatal; prenatal; prenatal exposure; programs; simulation; skills; statistics; symposium; tool; usability; user-friendly

Project Summary: My goal is to build an independent research program in the development of causal inference methods for investigating environmental causes of childhood cancer. This K01 will enable me to conduct the focused, intensive research that will lay the groundwork for that program and to acquire the environmental, biological, and epidemiological training needed to maximize the rigor and impact of my work. Research: We propose to develop new causal machine learning (ML) methods that enable rigorous analysis of environmental natural experiments (NE) for estimation of the causal effects of environmental exposures on childhood cancer. Classical approaches to studying relationships between environmental exposures and childhood cancer are plagued with challenges and are yielding inconsistent findings. We contend that the recent proliferation of local environmental regulatory programs has created ample relevant NEs, which provide a powerful alternative approach to study these relationships. However, existing methods for NE analysis are poorly-suited for environmental health contexts. In particular, existing methods fail in the presence of rare outcomes like childhood cancer (Aim 1), and they are not able to provide insight into the timing at which children are most susceptible to any adverse exposure effects (Aim 2). We propose causal ML methods that overcome these challenges and apply them to a NE to study the effects of traffic-related air toxics on childhood leukemia. We also provide open source software implementing these methods (Aim 3). Career Development and Training: Given my extensive prior training and experience in statistics and data science, the primary aim of the training funded by this award will be the acquisition of subject-matter proficiency, which will provide me with the insights needed to create more effective and impactful environmental health methods. Specifically, I will pursue knowledge in the biology and epidemiology of childhood cancer and in environmental health and exposure biology. The training will be achieved through a combination of (1) hands-on collaborative research as described above; (2) intensive cross-disciplinary mentorship, with mentors specializing in environmental health, pediatric oncology, cancer biology and epidemiology, and statistics; (3) carefully-selected coursework in the Departments of Epidemiology, Environmental Health, and Cell Biology at Harvard; and (4) relevant conferences, workshops, and seminars. I will place special emphasis on establishing a network of expert collaborators in all my areas of training. Environment: The Harvard Medical Campus is home to the top research teams worldwide in both childhood cancer and environmental health. Due to Harvard’s position at the forefront of scientific discovery in these fields, its unparalleled resources, its vibrant intellectual atmosphere, and its promotion of collaborative science that integrates knowledge across disciplines, it provides an ideal environment in which to train on these topics.

项目总结： 我的目标是在开发因果推理方法方面建立一个独立的研究计划 调查儿童癌症的环境原因。这款K01将使我能够进行专注的、 密集的研究将为该计划奠定基础，并获得环境、生物、 以及流行病学培训，以最大限度地提高我的工作的严谨性和影响力。 研究：我们建议开发新的因果机器学习(ML)方法，使严格的分析成为可能 环境自然实验(NE)，用于估计环境暴露的因果影响 儿童癌症。研究环境暴露与环境污染之间关系的经典方法 儿童癌症充满了挑战，并产生了不一致的结果。我们认为， 最近地方环境监管方案的激增创造了大量相关的NE，它们提供了 这是研究这些关系的一种强有力的替代方法。然而，现有的NE分析方法是 不适合环境健康环境。特别是，现有的方法在罕见的情况下会失败 结果，如儿童癌症(目标1)，他们无法提供洞察力的时间 儿童最容易受到任何不良暴露影响(目标2)。我们提出因果最大似然方法 克服这些挑战，并将其应用于东北地区，以研究与交通相关的空气毒物对儿童的影响 白血病。我们还提供了实现这些方法的开源软件(目标3)。 职业发展和培训：考虑到我之前在统计和数据方面的广泛培训和经验 科学，该奖项资助的培训的主要目的将是获得主题 熟练，这将为我提供所需的洞察力，以创造更有效和更有影响力的 环境卫生方法。具体地说，我将学习生物学和流行病学方面的知识。 儿童癌症和环境健康与暴露生物学。培训将通过以下方式实现 结合(1)如上所述的动手合作研究；(2)密集的跨学科 导师制，导师专门从事环境健康、儿科肿瘤学、癌症生物学和 流行病学和统计学；(3)流行病学系精心挑选的课程， 哈佛大学环境健康和细胞生物学；以及(4)相关会议、研讨会和研讨会。我 我将特别重视在我的所有培训领域建立一个专家合作者网络。 环境：哈佛医学院是全球顶尖研究团队的所在地，这两个孩子 癌症与环境健康。由于哈佛在这些领域的科学发现方面处于领先地位 菲尔兹，其无与伦比的资源，充满活力的知识氛围，以及对协作科学的促进 它整合了跨学科的知识，提供了一个理想的环境，可以在其中进行这些主题的培训。

项目成果

Mobile Source Benzene Regulations and Risk of Childhood and Young Adult Hematologic Cancers in Alaska: A Quasi-experimental Study.

阿拉斯加移动源苯法规与儿童和青年血液癌症的风险：一项准实验研究。

• DOI: 10.1097/ede.0000000000001594
• 发表时间: 2023
• 期刊: Epidemiology (Cambridge, Mass.)
• 作者: Nethery,RachelC;Vega,Sofia;Frazier,ALindsay;Laden,Francine
• 通讯作者: Laden,Francine