How do multi-heme cytochromes form transmembrane wires and conduct electrons between the cell and environment?
How do multi-heme cytochromes form transmembrane wires and conduct electrons between the cell and environment?
批准号:
BB/H007288/1
负责人:
Thomas Clarke
金额:
$44.04万
依托单位国家:
英国
项目类别:
Research Grant
财政年份:
2010
资助国家:
英国
项目状态:
已结题
起止时间:
2010 至 --
中文摘要
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英文摘要
Humans obtain the energy they need for life by respiring ('breathing') oxygen. This process involves using electrons extracted from the food we eat to convert oxygen to water in a process known as oxygen reduction. Free energy is released in this process and we use this to make ATP, which is the universal energy currency of life. Our dependency on oxygen makes us obligate aerobes -take away the oxygen and we die. Thus humans are confined to living on the surface of planet Earth where oxygen is freely available. However, the vast proportion of Earth's habitable environments are not exploited by humans, but by a diversity of micro-organisms, including bacteria, that can live in the absence of oxygen. What is truly amazing is that some of these bacteria can live deep in the Earth's subsurface and survive by 'breathing rocks'. This is because some of the most abundant respiratory substrates in the Earth's subsurface environments are insoluble minerals, particularly minerals of iron. Such minerals give some soils a reddish colour and they can also be seen as red seams in exposed cliffs. In fact 'iron respiration' is amongst the most widespread respiratory process in anoxic zones and so has wide environmental significance. For example it directly impacts on the balance of several biogeochemical cycles such as the nitrogen, sulphur and carbon cycles and this can in turn influence the release of potent greenhouse gases, such as nitrous oxide. It can also be detrimental to the oil industry through contributing to the dissolution of subsurface or submarine oil pipes. In some aspects the way bacteria respire mineral iron is similar to the way in which they respire oxygen, using electrons to 'reduce' the respiratory substrate. Thus, electrons generated by metabolism inside the bacterial cell are passed to the iron, which changes its electronic state from a so-called 'ferric state' to a 'ferrous state' by the negatively charged electron. However, because the ferric iron mineral is a large insoluble particle it cannot freely diffuse into bacterial cells. Consequently, if a bacterium is to be able to utilise an iron mineral as a respiratory electron acceptor it must have a molecular answer to a perplexing question. 'How can the bacteria move electrons to the outside of the cell where the mineral is located when the electrons are generated by cellular metabolism inside the cell?' This is a very challenging problem for a so-called Gram negative bacteria since they are surrounded by two sealed cell membranes, the inner membrane and the outer membrane, and the insoluble mineral iron lies outside of this outer membrane. Part of the solution to the problem lies in special 'electron transfer proteins' that actually sit on the outside of the cell where they can pass electrons to extracellular insoluble minerals. However, this is not the whole solution, since there still needs to be a specialised electron transfer system to take the electrons across the outer membrane to mediate the passage of electrons out of the cell to these cell-surface proteins. The mechanism by which this electron transfer out of the cell to the so called 'microbe-mineral interface' occurs is still not known. It represents a major question in the study of the biochemistry of an environmentally abundant group of bacteria. Answering it will provide new insights into bacterial energetic processes. It will also have important biotechnological impacts since there is potential for using mineral oxide respiring bacteria in bioremediation processes for the clean up of environments contaminated with toxic organic pollutants (e.g. oil leaks) or radioactive metals, such as Uranium (VI). Their use in microbial fuel cells where the bacteria can be used to generate electric currents using electrodes as solid extracellular electron acceptors is also being explored.
期刊论文(9)
专著(0)
科研奖励(0)
会议论文
DOI:
10.1038/srep11677
发表时间:
2015-07-01
期刊:
Scientific reports
影响因子:
4.6
作者:
[Edwards MJ, White GF, Norman M, Tome-Fernandez A, Ainsworth E, Shi L, Fredrickson JK, Zachara JM, Butt JN, Richardson DJ, Clarke TA]
通讯作者:
Clarke TA
DOI:
10.1073/pnas.1220074110
发表时间:
2013-04-16
期刊:
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
影响因子:
11.1
作者:
[White, Gaye F., Shi, Zhi, Clarke, Thomas A.]
通讯作者:
Clarke, Thomas A.
DOI:
10.3389/fmicb.2015.00332
发表时间:
2015
期刊:
Frontiers in microbiology
影响因子:
5.2
作者:
[Beckwith CR, Edwards MJ, Lawes M, Shi L, Butt JN, Richardson DJ, Clarke TA]
通讯作者:
Clarke TA
Tuning extracellular cytochromes for enhanced metal recovery and nanoparticle formation
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批准号:BB/X011453/1
-
项目类别:Research Grant
-
资助金额:$37.03万
-
财政年份:2023
-
负责人:Thomas Clarke
-
依托单位:
The assembly and folding pathway of porin cytochrome complexes in the bacterial outer membrane
-
批准号:BB/P01819X/1
-
项目类别:Research Grant
-
资助金额:$49.36万
-
财政年份:2018
-
负责人:Thomas Clarke
-
依托单位:
Molecular Basis for Controlled Transmembrane Electron Transfer
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批准号:BB/K00929X/1
-
项目类别:Research Grant
-
资助金额:$40.96万
-
财政年份:2013
-
负责人:Thomas Clarke
-
依托单位:
Visualisation of proteoliposomes able to interact with isoluble minerals.
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批准号:BB/J013765/1
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项目类别:Research Grant
-
资助金额:$0.16万
-
财政年份:2012
-
负责人:Thomas Clarke
-
依托单位:
The Ecology of Mesopelagic Fishes in the Central Pacific Ocean
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资助金额:$3.68万
-
财政年份:1980
-
负责人:Thomas Clarke
-
依托单位:
Continued Studies on the Ecology of Mesopelagic Fishes in The Central Pacific Ocean
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批准号:7709202
-
项目类别:Continuing Grant
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资助金额:$17.16万
-
财政年份:1977
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负责人:Thomas Clarke
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依托单位:
Ecology of Pelagic Fishes in the Central Pacific Ocean
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批准号:7306602
-
项目类别:Standard Grant
-
资助金额:$10.23万
-
财政年份:1973
-
负责人:Thomas Clarke
-
依托单位:
国内基金
海外基金
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