Open source pipelines for integrated metabolomics analysis by NMR and mass spectrometry

通过 NMR 和质谱进行集成代谢组学分析的开源管道

• 批准号: BB/M019985/1
• 负责人: Mark Viant
• 金额: $ 6.54万
• 依托单位: University of Birmingham
• 依托单位国家: 英国
• 项目类别: Research Grant
• 财政年份: 2015
• 资助国家: 英国
• 起止时间: 2015 至 无数据
• 项目状态: 已结题
• 来源: https://gtr.ukri.org/projects?ref=BB%2FM019985%2F1
• 关键词: Open; source; pipelines; integrated; metabolomics

Abstracts are not currently available in GtR for all funded research. This is normally because the abstract was not required at the time of proposal submission, but may be because it included sensitive information such as personal details.

目前GtR中并没有所有资助研究的摘要。这通常是因为在提交提案时不需要摘要，但也可能是因为摘要中包含个人详细信息等敏感信息。

项目成果

Computational tools and workflows in metabolomics: An international survey highlights the opportunity for harmonisation through Galaxy.

• DOI: 10.1007/s11306-016-1147-x
• 发表时间: 2017
• 期刊: METABOLOMICS
• 影响因子: 3.6
• 作者: Weber, Ralf J. M.;Lawson, Thomas N.;Salek, Reza M.;Ebbels, Timothy M. D.;Glen, Robert C.;Goodacre, Royston;Griffin, Julian L.;Haug, Kenneth;Koulman, Albert;Moreno, Pablo;Ralser, Markus;Steinbeck, Christoph;Dunn, Warwick B.;Viant, Mark R.
• 通讯作者: Viant, Mark R.

Galaxy-M: a Galaxy workflow for processing and analyzing direct infusion and liquid chromatography mass spectrometry-based metabolomics data.

• DOI: 10.1186/s13742-016-0115-8
• 发表时间: 2016
• 期刊: GigaScience
• 影响因子: 9.2
• 作者: Davidson RL;Weber RJ;Liu H;Sharma-Oates A;Viant MR
• 通讯作者: Viant MR

mzML2ISA & nmrML2ISA: generating enriched ISA-Tab metadata files from metabolomics XML data.

• DOI: 10.1093/bioinformatics/btx169
• 发表时间: 2017-08-15
• 期刊: Bioinformatics (Oxford, England)
• 作者: Larralde M;Lawson TN;Weber RJM;Moreno P;Haug K;Rocca-Serra P;Viant MR;Steinbeck C;Salek RM
• 通讯作者: Salek RM

Computational tools and workflows in metabolomics: An international survey highlights the opportunity for harmonisation through Galaxy

代谢组学中的计算工具和工作流程：一项国际调查强调了通过 Galaxy 进行协调的机会

• DOI: 10.17863/cam.8310
• 发表时间: 2016
• 作者: Weber R