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Understanding the mechanism of a nematode molecular Achilles' heel.

了解线虫分子阿喀琉斯之踵的机制。

基本信息

批准号：
BB/T002859/1
负责人：
Berndt Muller
金额：
$ 75.54万
依托单位：
University of Aberdeen
依托单位国家：
英国
项目类别：
Research Grant
财政年份：
2020
资助国家：
英国
起止时间：
2020 至无数据
项目状态：
已结题

来源：
https://gtr.ukri.org/projects?ref=BB%2FT002859%2F1
关键词：
Understanding mechanism nematode molecular Achilles

项目摘要

Parasitic nematodes are major challenges to human health and global food security. The impact of these animals is exacerbated by drug resistance, withdrawal of existing treatments due to environmental concerns, and expansion of parasites into new environments through climate change and human migration. There is thus an urgent need to develop new control methods. Ideal targets for the development of new therapeutics would be molecules and processes that are found only in nematodes and are absent from the animals and plants that they infect. Ideally these targets would be found in all nematodes, enabling the development of a drug active against a broad range of nematode infections. One such process is spliced leader trans-splicing, which is an essential step by which many nematode genes become active.We have shown that two 'molecular machines' are required for spliced leader trans-splicing. Nematodes in which these machines are non-functional stop developing and are infertile. However, we don't have the detailed knowledge of these machines needed to understand how they function, a necessary precondition to properly develop drugs that inhibit them. In particular, we don't know all the components involved, and we don't understand those that we do know about. To address these challenges, we are systematically studying the components of these machines in the experimental nematode Caenorhabditis elegans. Our work so far has led to the identification of a new component which has properties that make it an ideal potential drug target. The proposed research will extend our initial studies, to give a comprehensive picture of the molecular machinery that underpins this essential step in nematode gene expression. The process of spliced leader trans-splicing has evolved multiple times in different groups of organisms, many of which are also important parasites. Thus, as well as allowing the development of potential new drugs to treat nematode infections, our findings will serve as a starting point to investigate the similarities and differences between other 'versions' of trans-splicing.

寄生线虫是人类健康和全球粮食安全的重大挑战。这些动物的影响因抗药性、由于环境问题而撤回现有治疗方法以及通过气候变化和人类迁徙将寄生虫扩展到新环境而加剧。因此，迫切需要开发新的控制方法。开发新疗法的理想目标是只在线虫中发现的分子和过程，而线虫感染的动植物中没有这些分子和过程。理想情况下，这些靶点将在所有线虫中找到，从而能够开发出一种有效对抗广泛线虫感染的药物。其中一个过程是剪接前导反式剪接，这是许多线虫基因激活的关键步骤。我们已经证明，剪接前导反式剪接需要两个‘分子机器’。这些机器不起作用的线虫停止发育并不育。然而，我们并不了解这些机器如何工作所需的详细知识，而这是适当开发抑制它们的药物的必要前提。特别是，我们不知道涉及的所有组件，也不了解我们确实知道的那些组件。为了应对这些挑战，我们正在系统地研究实验线虫线虫中这些机器的组件。到目前为止，我们的工作已经鉴定出一种新的成分，它具有使其成为理想的潜在药物靶点的特性。这项拟议的研究将扩展我们的初步研究，以全面了解支撑线虫基因表达这一关键步骤的分子机制。剪接前导的反式剪接过程在不同的生物群中进化了多次，其中许多也是重要的寄生虫。因此，除了允许开发治疗线虫感染的潜在新药外，我们的发现将作为调查其他反式剪接“版本”之间的相似和差异的起点。

项目成果

期刊论文数量（5）

专著数量（0）

科研奖励数量（0）

会议论文数量（0）

专利数量（0）

SLIDR and SLOPPR: flexible identification of spliced leader trans-splicing and prediction of eukaryotic operons from RNA-Seq data.

DOI：
10.1186/s12859-021-04009-7
发表时间：
2021-03-22
期刊：
BMC bioinformatics
影响因子：
3
作者：
Wenzel MA;Müller B;Pettitt J
通讯作者：
Pettitt J

A novel, essential trans-splicing protein connects the nematode SL1 snRNP to the CBC-ARS2 complex.

DOI：
10.1093/nar/gkac534
发表时间：
2022-07-22
期刊：
NUCLEIC ACIDS RESEARCH
影响因子：
14.9
作者：
Fasimoye, Rotimi Yemi;Spencer, Rosie Elizabeth Barker;Soto-Martin, Eva;Eijlers, Peter;Elmassoudi, Haitem;Brivio, Sarah;Mangana, Carolina;Sabele, Viktorija;Rechtorikova, Radoslava;Wenzel, Marius;Connolly, Bernadette;Pettitt, Jonathan;Mueller, Berndt
通讯作者：
Mueller, Berndt

Resolution of polycistronic RNA by SL2 trans-splicing is a widely conserved nematode trait.