Transforming molecular biophysics with mass photometry

通过质量光度测定改变分子生物物理学

• 批准号: EP/T03419X/1
• 负责人: Philipp Kukura
• 金额: $ 225.29万
• 依托单位: University of Oxford
• 依托单位国家: 英国
• 项目类别: Fellowship
• 财政年份: 2021
• 资助国家: 英国
• 起止时间: 2021 至 无数据
• 项目状态: 未结题
• 来源: https://gtr.ukri.org/projects?ref=EP%2FT03419X%2F1
• 关键词: Transforming; molecular; biophysics; mass; photometry

Understanding how biomolecules, drugs and other molecules work together is one of the most important areas of study in the life sciences - central to our understanding of basic biology and to developing new drugs. However, it can be difficult to obtain accurate information about these different interactions. To make this possible, we need tools that have three key features. They should be: i) highly sensitive and accurate, ii) able to capture changes over time rather than only static snapshots, and iii) able to operate in the natural environment of proteins or in comparable conditions. In recent decades, much work has gone into developing such tools and researchers have made huge progress in this area. Still, none of the tools available now encompasses all three of the features we urgently need. Our group has developed a completely new tool that could solve this problem, with the potential to revolutionise how we study molecular interactions. We call the approach 'mass photometry' (MP) because it uses light (in a microscope) to measure the mass of molecules in a liquid sample. From the amount of light scattered by a molecule, we can calculate its mass with a very high level of accuracy. This technology amounts to only the third way of measuring mass, after gravity-based methods and mass spectrometry.MP has already attracted high levels of interest from fellow researchers working in universities and in the pharmaceutical industry. It has also led to the creation of a successful spinout company, Refeyn. Still, for the potential of this cutting-edge technology to be fully realised, we need to make critical improvements. For this fellowship, we have set objectives to improve four key aspects: 1. Measurement resolution; 2. Measurement precision; 3. The range of sample concentrations for which MP is applicable; and 4. How we analyse the data and process the images we obtain. It is these improvements that will transform MP into a potentially revolutionary approach for studying biomolecular structure and function. We will conduct this work over five years at the University of Oxford's Department of Chemistry. Our team will consist of the fellowship holder, who will guide and oversee the study, and four postdoctoral researchers, who will lead research on each of the four objectives alongside two PhD students. Our ultimate goal is to advance MP from a proof-of-concept technology to a well-accepted, transformative tool for researchers working across the life sciences - from those doing biological discovery research to those developing drugs and clinical diagnostics. In support of that goal, we will also engage in two major collaborative/outreach activities for the duration of this fellowship. First, we will work with a major pharmaceutical company, exploring how MP can support their drug development work. Second, we will operate a MP facility in our university department, which will be open to all fellow researchers to use in their own projects at minimal cost. These two activities will help us validate our techniques, test MP on different applications, gather feedback from MP users, and spread the word about our technology and what it can do to the broader research community. This fellowship will enable Philipp Kukura to build on what he has been working towards since becoming an independent academic a decade ago: changing our perception of what we can measure with light, and opening up new inroads in diagnostics, biological discovery and drug development. Bridging the advanced optics and life sciences communities, he will use this fellowship to solidify his position as the global leader in this field, share his vision with the next generation of researchers, and create an MP powerhub in Oxford. Ultimately, this will not only benefit the research community, but the UK economy as well, with the creation of local jobs, boosting the UK's prime life sciences industry and advancing health.

了解生物分子、药物和其他分子如何协同工作是生命科学中最重要的研究领域之一，这对我们理解基础生物学和开发新药至关重要。然而，很难获得关于这些不同相互作用的准确信息。为了实现这一点，我们需要具备三个关键特征的工具。它们应该是：i）高度灵敏和准确，ii）能够捕获随时间的变化而不仅仅是静态快照，以及iii）能够在蛋白质的自然环境中或在可比条件下操作。近几十年来，人们在开发此类工具方面做了大量工作，研究人员在这一领域取得了巨大进展。尽管如此，现在可用的工具中没有一个包含我们迫切需要的所有三个功能。我们的团队已经开发出一种全新的工具，可以解决这个问题，有可能彻底改变我们研究分子相互作用的方式。我们称这种方法为“质量光度法”（MP），因为它使用光（在显微镜中）来测量液体样品中分子的质量。从分子散射的光量，我们可以非常精确地计算出它的质量。该技术是继重力法和质谱法之后的第三种测量质量的方法。MP已经引起了大学和制药行业研究人员的高度兴趣。它还导致了一个成功的分拆公司，Refeyn的创建。不过，为了充分发挥这项尖端技术的潜力，我们需要做出关键的改进。对于这个奖学金，我们设定了目标，以改善四个关键方面：1。测量分辨率; 2。测量精度; 3. MP适用的样品浓度范围;以及4.我们如何分析数据和处理我们获得的图像。正是这些改进将MP转变为研究生物分子结构和功能的潜在革命性方法。我们将在牛津大学化学系进行这项工作超过五年。我们的团队将包括奖学金保持器，谁将指导和监督研究，和四名博士后研究人员，谁将领导研究的四个目标的每一个与两名博士生。我们的最终目标是将MP从一种概念验证技术提升为一种广泛接受的变革性工具，适用于生命科学领域的研究人员-从生物发现研究人员到药物和临床诊断开发人员。为了支持这一目标，我们还将在本研究金期间开展两项主要的合作/外联活动。首先，我们将与一家大型制药公司合作，探索MP如何支持他们的药物开发工作。第二，我们将在我们的大学部门运营一个MP设施，该设施将向所有研究人员开放，以最低的成本在他们自己的项目中使用。这两项活动将帮助我们验证我们的技术，在不同的应用程序上测试MP，收集MP用户的反馈，并向更广泛的研究社区传播我们的技术及其作用。这项奖学金将使Philipp Kukura能够在十年前成为独立学者以来一直致力于实现的目标的基础上继续努力：改变我们对光可以测量的东西的看法，并在诊断，生物发现和药物开发方面开辟新的进展。作为先进光学和生命科学社区的桥梁，他将利用这笔奖学金巩固他在该领域的全球领导者地位，与下一代研究人员分享他的愿景，并在牛津创建MP powerhub。最终，这不仅将使研究界受益，也将使英国经济受益，创造当地就业机会，促进英国主要生命科学产业并促进健康。

项目成果

Label-free tracking and mass measurement of single protein complexes on lipid bilayers

脂质双层上单一蛋白质复合物的无标记追踪和质量测量

• DOI: 10.1016/j.bpj.2021.11.2810
• 发表时间: 2022
• 期刊: Biophysical Journal
• 影响因子: 3.4
• 作者: Foley E

A quantitative description for optical mass measurement of single biomolecules

单个生物分子光学质量测量的定量描述

• DOI: 10.1101/2023.03.28.534430
• 发表时间: 2023
• 作者: Becker J

A Quantitative Description for Optical Mass Measurement of Single Biomolecules.

• DOI: 10.1021/acsphotonics.3c00422
• 发表时间: 2023-08-16
• 期刊: ACS PHOTONICS
• 影响因子: 7
• 作者: Becker, Jan;Peters, Jack S.;Crooks, Ivor;Helmi, Seham;Synakewicz, Marie;Schuler, Benjamin;Kukura, Philipp
• 通讯作者: Kukura, Philipp

Single molecule mass photometry reveals the dynamic oligomerization of human and plant peroxiredoxins.

• DOI: 10.1016/j.isci.2021.103258
• 发表时间: 2021-11-19
• 期刊: iScience
• 影响因子: 5.8
• 作者: Liebthal M;Kushwah MS;Kukura P;Dietz KJ
• 通讯作者: Dietz KJ

Sensing force and charge at the nanoscale with a single-molecule tether.

使用单分子系链在纳米尺度上感测力和电荷。

• DOI: 10.1039/d1nr01970h
• 发表时间: 2021-08-07
• 期刊: Nanoscale
• 影响因子: 6.7
• 作者: Meng X ;Kukura P ;Faez S
• 通讯作者: Faez S