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PME & LES MOLECULAR DYNAMICS FOR STUDY OF SEQUENCE SPECIFIC DNA & RNA STRUCTURE

PME & LES MOLECULAR DYNAMICS FOR STUDY OF SEQUENCE SPECIFIC DNA & RNA STRUCTURE
PME
批准号：
6347861
负责人：
DAVID E KONERDING
金额：
$3.95万
依托单位：
UNIVERSITY OF CALIFORNIA, SAN FRANCISCO
依托单位国家：
美国
项目类别：
财政年份：
2000
资助国家：
美国
项目状态：
已结题
起止时间：
2000-07-01 至 2001-06-30
来源：
https://reporter.nih.gov/project-details/6347861
关键词：
biomedical resource computers informatics model design /development technology /technique

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英文摘要
We are applying the AMBER force field with Particle Mesh Ewald (PME) treatment of electrostatics and the Locally Enhanced Sampling (LES) method to predict the sequence specific structure of DNA and RNA duplexes. Results obtained from unrestrained molecular dynamics are compared against structures generated using NMR data. The Computer Graphics Laboratory facilities are instrumental to the visualization of the results.
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会议论文
DYNAMIC EFFECTS OF GEMCITABINE INCORPORATED TOPOI-DNA
DEVELOPMENT OF MIDASMOVIE 3 0: VISUALIZATION
PME & LES MOLECULAR DYNAMICS FOR STUDY OF SEQUENCE SPECIFIC DNA & RNA STRUCTURE
DEVELOPMENT OF MIDASMOVIE 3 0: VISUALIZATION
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