EUKARYOTIC TRNA PROCESSING BY RNASE P AND 3' RNASE
EUKARYOTIC TRNA PROCESSING BY RNASE P AND 3' RNASE
批准号:
6452772
负责人:
LEVINGER LOUIS
金额:
$3.15万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2001
资助国家:
美国
项目状态:
已结题
起止时间:
2001-06-01 至 2002-05-31
关键词:
DNA footprinting Drosophilidae RNA biosynthesis affinity chromatography chemical synthesis enzyme activity eukaryote gel mobility shift assay gene mutation genetic transcription ion exchange chromatography nucleic acid reconstitution nucleic acid sequence polymerase chain reaction posttranscriptional RNA processing ribonuclease III ribonuclease P site directed mutagenesis small nuclear RNA tissue /cell culture transfer RNA
中文摘要
真核生物转录的tRNA是作为前体转录的。5‘末端前导和3’末端拖尾分别被RNaseP和3‘-tRNase内切去除。发现在每个tRNA的3‘端的CCA不是转录编码的,必须由tRNA核苷酸转移酶分别添加到由3’-tRNase产生的新的3‘端。CCA位于每个tRNA的3‘端,不是转录编码的,必须由tRNA核苷酸转移酶加到由3’-tRNase产生的新的3‘端。我们研究了改变序列和结构对果蝇tRNA/His末端加工效率和动力学的影响。RNaseP和3‘-tRNase与普遍保守的D/T环三级接触区域的相互作用不同(Levinger等人,JBC 273:1015,1998)。3‘端CCA是真核生物3’-tRNase的反决定簇(Mohan等人,RNA 5:245,1999)。与RNaseP相比,3‘-tRNase在中间受体茎中的序列和结构似乎更重要,并且3’-tRNase可能与4/69碱基对接触(Mohan和Levinger,手稿正在准备中)。我们建议通过两种类型的实验来更全面地描述前tRNA末端加工的序列和结构要求。首先,我们希望用单核苷酸取代饱和果蝇tRNA/His的D和T环。我们将测试这些序列变化对末端加工效率和动力学以及对tRNA结构的影响。其次,人类线粒体tRNA的突变与各种遗传性疾病有关。人类线粒体tRNAs的A7445G突变与多种遗传性疾病有关。人类线粒体tRNA/Ser(UCN)中的A7445G突变导致非综合征性耳聋(Guan等,MCB 18:5868,1998)。A7445G将G->;UCU改变为紧跟在3‘-tRNase裂解位点(->;)之后的G->;CCU,理论上导致了3’端加工缺陷。我们假设这个取代过程是一个3‘-tRNase反决定簇。使用从培养的人类细胞中提取的线粒体tRNA加工提取物和tRNA前体的体外转录,我们建议表征假设的加工缺陷。
英文摘要
Eukaryotic tRNAs are transcribed as precursors. The 5' end leader and 3' end trailer are endonucleolytically removed by RNase P and by 3'- tRNase, respectively. CCA found at the 3' end of every tRNA is not transcriptionally encoded, and must be added by tRNA nucleotidyl transferase to the new 3' end produced by 3'-tRNase, respectively. CCA found at the 3' end of every tRNA is not transcriptionally encoded, and must be added by tRNA nucleotidyl transferase into the new 3'end produced by 3'-tRNase. We have investigated the effects of changing sequence and structure on the efficiency and kinetics of Drosophila tRNA/His end processing. RNase P and 3'-tRNase interact differently with the region of universally conserved D/T loop tertiary contacts (Levinger et al., JBC 273:1015, 1998). The 3' end CCA is an anti-determinant for eukaryotic 3'-tRNase (Mohan et al., RNA 5:245, 1999). Sequence and structure in mid-acceptor stem appear to be more important for 3'-tRNase than for RNase P, and 3'- tRNase may contact the 4/69 base pair (Mohan and Levinger, manuscript in preparation). We propose to more completely describe the sequence and structure requirements for pre-tRNA end processing through two types of experiments. First, we wish to saturate the D and T loops of Drosophila tRNA/His with single nucleotide substitutions. We will test the effect of these sequence changes on end processing efficiency and kinetics and on tRNA structure. Second, mutations in human mitochondrial tRNAs have been linked with various inherited diseases. The mutation A7445G in human mitochondrial tRNAs have been linked with various inherited diseases. The mutation A7445G in human mitochondrial tRNA/Ser(UCN) causes non-syndromic deafness (Guan et al., MCB 18:5868, 1998). A7445G, which changes G->UCU to G->CCU which immediately following the 3'-tRNase cleavage site (->), is theorized to caused a 3' end processing defect. We hypothesize that this substitution procedures a 3'- tRNase anti-determinant. Using a mitochondrial tRNA processing extract from cultured human cells and in vitro transcriptions of tRNA precursors, we propose to characterize the postulated processing defect.
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EUKARYOTIC TRNA PROCESSING BY RNASE P AND 3' RNASE
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批准号:6657549
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项目类别:
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资助金额:$3.04万
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财政年份:2002
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负责人:LEVINGER LOUIS
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依托单位:
EUKARYOTIC TRNA PROCESSING BY RNASE P AND 3' RNASE
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批准号:6595207
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项目类别:
-
资助金额:$3.04万
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财政年份:2002
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负责人:LEVINGER LOUIS
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依托单位:
EUKARYOTIC TRNA PROCESSING BY RNASE P AND 3' RNASE
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批准号:6594599
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项目类别:
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资助金额:$3.04万
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财政年份:2002
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负责人:LEVINGER LOUIS
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依托单位:
EUKARYOTIC TRNA PROCESSING BY RNASE P AND 3' RNASE
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批准号:6478825
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项目类别:
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资助金额:$3.04万
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财政年份:2001
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负责人:LEVINGER LOUIS
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依托单位:
EUKARYOTIC TRNA PROCESSING BY RNASE P AND 3' RNASE
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批准号:6318352
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项目类别:
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资助金额:$3.15万
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财政年份:2000
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负责人:LEVINGER LOUIS
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依托单位:
SEQUENCE AND STRUCTURE SIGNALS FOR 5S RNA PROCESSING IN DROSOPHILA MELANOGASTER
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批准号:6107222
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项目类别:
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资助金额:$20.71万
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财政年份:1999
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负责人:LEVINGER LOUIS
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依托单位:
SEQUENCE AND STRUCTURE SIGNALS FOR 5S RNA PROCESSING IN DROSOPHILA MELANOGASTER
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批准号:6217804
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项目类别:
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资助金额:$20.71万
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财政年份:1999
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负责人:LEVINGER LOUIS
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依托单位:
SEQUENCE AND STRUCTURE SIGNALS FOR 5S RNA PROCESSING IN DROSOPHILA MELANOGASTER
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批准号:6271615
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项目类别:
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资助金额:$18.63万
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财政年份:1998
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负责人:LEVINGER LOUIS
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依托单位:
SEQUENCE AND STRUCTURE SIGNALS FOR 5S RNA PROCESSING IN DROSOPHILA MELANOGASTER
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批准号:6240122
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项目类别:
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资助金额:$22.52万
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负责人:LEVINGER LOUIS
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依托单位:
SEQUENCE AND STRUCTURE SIGNALS FOR 5S RNA PROCESSING IN DROSOPHILA MELANOGASTER
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批准号:3841625
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项目类别:
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资助金额:$0.0万
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财政年份:--
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负责人:LEVINGER LOUIS
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依托单位:
SEQUENCE AND STRUCTURE SIGNALS FOR 5S RNA PROCESSING IN DROSOPHILA MELANOGASTER
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批准号:5211737
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项目类别:
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资助金额:$0.0万
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财政年份:--
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负责人:LEVINGER LOUIS
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依托单位:--
SEQUENCE AND STRUCTURE SIGNALS FOR 5S RNA PROCESSING IN DROSOPHILA MELANOGASTER
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批准号:3734399
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项目类别:
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资助金额:$0.0万
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财政年份:--
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负责人:LEVINGER LOUIS
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依托单位:
SEQUENCE AND STRUCTURE SIGNALS FOR 5S RNA PROCESSING IN DROSOPHILA MELANOGASTER
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批准号:3755972
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项目类别:
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资助金额:$0.0万
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财政年份:--
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负责人:LEVINGER LOUIS
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依托单位:
SEQUENCE AND STRUCTURE SIGNALS FOR 5S RNA PROCESSING IN DROSOPHILA MELANOGASTER
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批准号:3777953
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项目类别:
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资助金额:$0.0万
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财政年份:--
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负责人:LEVINGER LOUIS
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依托单位:
海外基金