MACCHESS CONSORTIUM FOR LARGE MACROMOLECULAR STRUCTURES: HERPES VIRUS
MACCHESS CONSORTIUM FOR LARGE MACROMOLECULAR STRUCTURES: HERPES VIRUS
批准号:
6667800
负责人:
JAMES M HOGLE
金额:
$14.27万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2002
资助国家:
美国
项目状态:
已结题
起止时间:
2002-09-30 至 2003-08-14
中文摘要
青霉菌胃蛋白酶(EC 3.2.23.X)是一种天冬氨酸蛋白酶
来自真菌青霉菌 为了准备数据
在CHESS收集时,晶体是由天然酶和
其与两种环状膦酸酯抑制剂的络合物,
甲基[环-7 [(2R)-((N-缬氨酰基)
氨基)-2-(羟基-(1S)-1-甲氧羰基-2-苯基-乙氧基)氧膦
(PP6)和甲基
环[(2S)-2-[[(1R)-1-(N-(L-N-(3-甲基丁酰基)缬氨酰基-L-缬氨酰基)氨基)-
(PP7)。 膦酸盐抑制剂作为过渡的模拟物
在良好的衬底的分裂状态。 环化
抑制剂降低了它的灵活性,降低了熵成本,
与酶结合。 在国际象棋,晶体被转移到
母液溶液含有增加量的
冷冻保护剂,甘油。 最终溶液含有20%甘油,
40%饱和硫酸铵和100 mM乙酸钠,pH 4.6。
五个晶体的数据,一个天然的,两个复合体,
在100 K下用波长为0.919的X射线收集 关于ADSC
F1站的Quantum-4 CCD探测器。 原始数据经过处理
至0.95 :针对143710个独特反射测量了415771个数据
(Rmerge = 6.8%),88.1%完成。 每一颗水晶的数据
复合物处理至0.90 分辨率 对于PP6,614135
测量由174924个独特的反射(Rmerge = 4.2%)进行,
89.7%完成;对于PP7,对156276个样本进行了459707次测量
唯一反射(Rmerge = 5.3%),完成80.1%至0.90 .的
目前正在根据这些数据完善三个模型。 的
晶体学残差为11.2%,为11.8
PP7复合物为11.0%。
英文摘要
Penicillopepsin (EC 3.2.23.X) is an aspartic proteinase isolated
from the fungus Penicillium janthinellum. In preparation for the data
collection at CHESS, crystals were grown of the native enzyme and of
its complexes with two cyclic phosphonate inhibitors,
methyl[cyclo-7[(2R)-((N-valyl)
amino)-2-(hydroxyl-(1S)-1-methyoxycarbonyl-2-phenyl-ethoxy)phosphinyloxy
(PP6) and methyl
cyclo[(2S)-2-[[(1R)-1-(N-(L-N-(3-methylbutanoyl)valyl-L-aspartyl)amino)-
(PP7). The phosphonate inhibitors act as mimics of the transition
state in the cleavage of good substrates. Cyclization of the
inhibitor reduces its flexibility and lowers the entropic cost of
binding to the enzyme. At CHESS, crystals were transferred to
solutions of the mother liquor containing increasing amounts of the
cryoprotectant, glycerol. The final solution contained 20% glycerol,
40% saturated ammonium sulfate and 100 mM sodium acetate at pH 4.6.
Data from five crystals, one of the native and two of each complex,
were collected at 100 K with X-rays of wavelength 0.919 on the ADSC
Quantum-4 CCD detector at station F1. The native data were processed
to 0.95 : 415771 data were measured for 143710 unique reflections
(Rmerge = 6.8%), 88.1% complete. The data from one crystal of each
complex were processed to 0.90 resolution. For PP6, 614135
measurements were made of 174924 unique reflections (Rmerge = 4.2%),
89.7% complete; for PP7, 459707 measurements were made of 156276
unique reflections (Rmerge = 5.3%), 80.1% complete to 0.90 . The
three models are currently being refined against these data. The
crystallographic residuals are 11.2% for the native, 11.8% for the PP6
complex and 11.0% for the PP7 complex.
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MACCHESS CONSORTIUM FOR LARGE MACROMOLECULAR STRUCTURES: HERPES VIRUS
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批准号:6491123
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项目类别:
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资助金额:$14.27万
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财政年份:2001
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负责人:JAMES M HOGLE
-
依托单位:
MACCHESS CONSORTIUM FOR LARGE MACROMOLECULAR STRUCTURES: HERPES VIRUS
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资助金额:$2.6万
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STRUCTURE OF ENZYME SUBSTRATE COMPLEX FOR GENERATION OF UDP N ACETYLMURAMIC ACID
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MOLECULAR AND STRUCTURAL APPROACHES TO ANTIVIRALS
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资助金额:$29.3万
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POLIOVIRUS AS A MODEL FOR THE DESIGN OF ANTIVIRAL DRUGS
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