Nutritional Control of Transcription Factor Expression

转录因子表达的营养控制

• 批准号: 7047133
• 负责人: MICHAEL S. KILBERG
• 金额: $ 28.91万
• 依托单位: UNIVERSITY OF FLORIDA
• 依托单位国家: 美国
• 财政年份: 2006
• 资助国家: 美国
• 起止时间: 2006-03-01 至 2011-02-28
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/7047133
• 关键词: DNA footprinting; aminoacid; binding proteins; chromatin immunoprecipitation; dietary proteins; dietary restriction; gel mobility shift assay; gene deletion mutation; gene expression; gene targeting; genetic regulatory element; genetic transcription; laboratory rat; nutrition related tag; phosphorylation; posttranslational modifications; protein biosynthesis; protein isoforms; protein protein interaction; protein structure function; site directed mutagenesis; tissue /cell culture; transcription factor; western blottings

DESCRIPTION (provided by applicant): Mammalian cells respond to nutritional limitation of protein/amino acids by increasing the expression of a wide spectrum of proteins via a signaling pathway that will be referred to as the Amino Acid Response (AAR). Although it is known that amino acid availability can modulate protein expression, the mechanisms by which these events occur are not well understood. Using human HepG2 hepatoma cells, we have documented previously that amino acid limitation increases the expression of the bZIP transcription factor C/EBPb through transcriptional control and that, in turn, an elevated level of C/EBPb induces transcription from amino acid responsive genes. Initial studies for this application have yielded the novel observation that there is amino acid response element (AARE) activity in a 93 bp fragment from the human C/EBPb gene 3' to the protein coding sequence. Preliminary experiments have also shown that amino acid limitation causes an increase in the total abundance of C/EBPb protein and an increase in the nuclear translocation of C/EBPb phosphorylated on Thr235. Our global hypothesis is that transcriptional control of human C/EBPb expression and post-translational control of C/EBPb function represent important regulatory steps in the AAR pathway. Using protein restricted diets in rats and amino acid limitation of HepG2 cells the Specific Aims of the proposed studies are to: 1) identify the genomic AARE responsible for amino acid-dependent transcription of the C/EBPb gene by using deletion analysis, in vivo footprinting, and single nucleotide mutagenesis; 2) identify the AARE binding proteins and characterize their role in the AAR pathway; 3) determine if there are changes in synthesis or turnover of one of the three C/EBPb protein isoforms (LAP*, LAP, LIP); and 4) investigate whether or not phosphorylation of C/EBPb is important in regulating the role that it plays in signaling amino acid availability. Our long-term goal is to understand how mammalian cells respond to their nutritional environment through gene expression, using amino acid availability as the model.

描述（由申请人提供）：哺乳动物细胞通过一种称为氨基酸反应（AAR）的信号传导途径增加广谱蛋白质的表达，从而对蛋白质/氨基酸的营养限制作出反应。虽然已知氨基酸的可用性可以调节蛋白质表达，但这些事件发生的机制还不清楚。使用人HepG 2肝癌细胞，我们以前已经证明，氨基酸限制通过转录控制增加bZIP转录因子C/EBPb的表达，反过来，C/EBPb水平升高诱导氨基酸应答基因的转录。对这一应用的初步研究已经产生了新的观察结果，即在人C/EBPb基因3'端至蛋白质编码序列的93 bp片段中存在氨基酸应答元件（AARE）活性。初步实验还表明，氨基酸限制导致C/EBPb蛋白总丰度的增加和Thr 235上磷酸化的C/EBPb核转位的增加。我们的假设是，人类C/EBPb表达的转录控制和C/EBPb功能的翻译后控制代表了AAR途径中的重要调控步骤。采用蛋白质限制性饮食和HepG 2细胞的氨基酸限制，本研究的具体目的是：1）通过缺失分析、体内足迹法和单核苷酸诱变来鉴定负责C/EBPb基因的氨基酸依赖性转录的基因组AARE; 2）鉴定AARE结合蛋白并表征它们在AAR途径中的作用; 3）确定三种C/EBPb蛋白质同种型（β *，β *，LIP）之一的合成或周转是否有变化;和4）研究C/EBPb的磷酸化在调节其在信号传导氨基酸可用性中所起的作用中是否重要。我们的长期目标是了解哺乳动物细胞如何通过基因表达对营养环境做出反应，使用氨基酸可用性作为模型。