Large Scale Sequencing and Analysis of Genomes

基因组大规模测序和分析

• 批准号: 7292838
• 负责人: ERIC S LANDER
• 金额: $ 400.5万
• 依托单位: MASSACHUSETTS INSTITUTE OF TECHNOLOGY
• 依托单位国家: 美国
• 财政年份: 2003
• 资助国家: 美国
• 起止时间: 2003-11-10 至 2006-11-30
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/7292838
• 关键词: cooperative study; gene expression; genome; molecular genetics; nucleic acid sequence

DESCRIPTION: (provided by applicant) The goal of this proposal is: To provide the scientific community with an unprecedented amount of assembled high-quality genome sequence, sufficient in quantity and quality to solve some of the central intellectual questions in genomics. In particular, the genome sequence will allow comparative studies to identify the vast majority of functional elements encoded in the human genome. It will also allow extensive characterization of the biological diversity in the animal and fungal kingdoms. We propose to do this, over a three-year period, by producing: Shotgun sequence: approximately 331 million reads yielding, approximately 205 Gb of high-quality raw bases, and approximately 32 Gb of high-quality draft genome assembly; Polished sequence: approximately 10 Gb; and Finished sequence: approximately 1.5 Gb. We also plan to aggressively improve the efficiency of the genome sequencing process. The cost of high quality draft sequence of a typical mammalian genome (about 2.7 Gb) will be approximately $25M in Year 1 and decrease to about $16M by Year 3.

描述：（由申请人提供）本提案的目标是： 为科学界提供数量空前的高质量基因组序列，在数量和质量上足以解决基因组学中的一些核心知识问题。 特别是，基因组序列将允许进行比较研究，以确定人类基因组中编码的绝大多数功能元件。 它还将允许在动物和真菌王国的生物多样性的广泛表征。 我们建议在三年期间通过以下方式做到这一点： 散弹枪序列： 约3.31亿个读段，产生约205 Gb的高质量原始碱基和约32 Gb的高质量草图基因组组装; 抛光序列：约10 Gb;以及 完成序列：约1.5 Gb。 我们还计划积极提高基因组测序过程的效率。典型哺乳动物基因组的高质量草图序列（约2.7 Gb）的成本在第1年约为2500万美元，到第3年降至约1600万美元。