The Genetics of Normal Variation in Human Pigmentation

人类色素沉着正常变异的遗传学

• 批准号: 7455800
• 负责人: Nanibaa' A Garrison
• 金额: $ 2.05万
• 依托单位: STANFORD UNIVERSITY
• 依托单位国家: 美国
• 财政年份: 2006
• 资助国家: 美国
• 起止时间: 2006-07-01 至 2008-09-30
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/7455800
• 关键词: Affect; Albinism; Arizona; Candidate Disease Gene; Collection; Color; DNA; Data; Depth; Environmental Risk Factor; Eye; Eye Color; Fellowship; Genes; Genetic; Genetic Determinism; Genetic Polymorphism; Genetic Variation; Genotype; Goals; Hair; Haplotypes; Human; Individual; Knowledge; Laboratory Research; Linkage Disequilibrium; Molecular; Monophenol Monooxygenase; Mus; Mutation; Names; Nucleic Acid Regulatory Sequences; Oculocutaneous Albinism; Phenotype; Pigmentation physiologic function; Pigments; Population; SNP genotyping; Sampling; Single Nucleotide Polymorphism; Site; Skin; Stratification; Study models; Surveys; TYR gene; TYRP1 gene; Testing; Tyrosine; Universities; Variant; Work; base; gene function; human disease; skin color; trait

DESCRIPTION (provided by applicant): The goal of this study is to identify the genes and polymorphisms that contribute to normal variation in human eye, hair, and skin color. Much of our understanding of human pigmentation genes come from studies of mutations in genes resulting in oculocutaneous albinism (OCA). Many polymorphisms in genes associated with OCA are likely to affect gene function in a subtle or quantitative way, and are expected to have similar effects on pigmentary phenotypes. The general approach will be to carry out a large-scale association study based on 1000 DMA samples collected from subjects at the University of Arizona and Stanford University. All samples will be genotyped for SNPs at 3 candidate genes. An underlying hypothesis of this proposal is that genetic variation in the expression of the TYR, TYRP1, and/or ASIP genes contributes to normal phenotypic variation. An association study will be performed to correlate the variation in polymorphic sites of regulatory regions of human pigmentation genes with phenotypic variation. This work will provide a deeper understanding of the genetic factors that contribute to human diversity and a model for studying human diseases caused by interaction between multiple genes and environmental factors.

描述（由申请人提供）：本研究的目的是鉴定导致人类眼睛、头发和肤色正常变异的基因和多态性。我们对人类色素沉着基因的了解大部分来自于对导致眼皮肤白化病（OCA）的基因突变的研究。与OCA相关的基因中的许多多态性可能以微妙或定量的方式影响基因功能，并且预计对猪的表型具有类似的影响。一般的方法将是进行一项大规模的关联研究的基础上，从亚利桑那大学和斯坦福大学的主题收集1000 DMA样本。所有样本将在3个候选基因处进行SNP基因分型。该提议的一个基本假设是TYR、TYRP 1和/或ASIP基因表达的遗传变异有助于正常的表型变异。将进行关联研究，以将人类色素沉着基因调控区多态性位点的变异与表型变异相关联。这项工作将使人们更深入地了解导致人类多样性的遗传因素，并为研究由多个基因和环境因素之间的相互作用引起的人类疾病提供一个模型。

项目成果

Predicting phenotype from genotype: normal pigmentation.

• DOI: 10.1111/j.1556-4029.2009.01317.x
• 发表时间: 2010-03-01
• 期刊: Journal of forensic sciences
• 影响因子: 1.6
• 作者: Valenzuela RK;Henderson MS;Walsh MH;Garrison NA;Kelch JT;Cohen-Barak O;Erickson DT;John Meaney F;Bruce Walsh J;Cheng KC;Ito S;Wakamatsu K;Frudakis T;Thomas M;Brilliant MH
• 通讯作者: Brilliant MH