PROTEIN-PROTEIN INTERACTION TEST IN CANDIDA ALBICANS

白色念珠菌中的蛋白质-蛋白质相互作用测试

• 批准号: 7876880
• 负责人: AARON P MITCHELL
• 金额: $ 23.03万
• 依托单位: CARNEGIE-MELLON UNIVERSITY
• 依托单位国家: 美国
• 财政年份: 2009
• 资助国家: 美国
• 起止时间: 2009-06-19 至 2011-05-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/7876880
• 关键词: Affect; Alleles; Animal Model; Antifungal Agents; Biological Assay; Biology; Candida albicans; Chimeric Proteins; Communities; Complex; Computer software; Computing Methodologies; Critical Pathways; DNA; Detection; Development; Drug resistance; Endosomes; Eukaryota; Future; Gene Expression; Genes; Genetic Code; Genetic Transcription; Genomics; Goals; Growth; Human; Image; Infection; Methodology; Methods; Microbial Biofilms; Molecular; Molecular Genetics; Molecular Profiling; Observer Variation; Organism; Outcome; Pathogenesis; Pathogenicity; Pathway Analysis; Pattern; Performance; Pharmaceutical Preparations; Property; Proteins; Regulatory Pathway; Reliance; Reporter Genes; Research; Resources; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Signal Transduction; Speed; Surface; System; Technology; Testing; Tissues; Two-Hybrid System Techniques; Vaccines; Vesicle; Yeast Model System; Yeasts; analytical tool; base; drug sensitivity; genetic manipulation; pathogen; promoter; prospective; protein protein interaction; public health relevance; research study; therapeutic development; vector; yeast two hybrid system

DESCRIPTION (provided by applicant): Our goal is to develop a simple, systematic protein-protein interaction assay in Candida albicans. This organism is the major invasive fungal pathogen of humans, and has been the focus of increasingly mechanistic studies, driven by advances in molecular and genomic technologies and resources. There is growing evidence that numerous unique regulatory pathways govern vital aspects of C. albicans growth and pathogenicity. Protein-protein interaction studies have been critical for pathway analysis in other organisms, but the relevant methodology for C. albicans has lagged behind other developments. We have developed a new protein-protein interaction test, the Vesicle Capture Interaction (VCI) assay that employs highly conserved eukaryotic machinery and minimal genetic manipulation. Interaction is detected through directed localization of fluorescent fusion proteins to endosome surfaces, yielding a punctate fluorescent signal. Images are evaluated through computational methods in order to limit observer bias in interpretation. The VCI assay detects interactions between two protein pairs in both the model yeast Saccharomyces cerevisiae and in C. albicans. We propose to develop a broadly applicable C. albicans VCI assay platform, including strains, vectors, analytical software, and a basic understanding of the gene expression parameters that govern detection. VCI analysis of C. albicans regulatory pathways will open new avenues toward development of therapeutics and a mechanistic understanding of pathogenicity. Conservation of assay components in all known eukaryote suggests that the VCI assay may be imported into other eukaryotic pathogens as well. PUBLIC HEALTH RELEVANCE: Candida albicans is the major invasive fungal pathogen of humans, causing lethal deep tissue infections and severe mucosal infections. This project will implement a new method to identify C. albicans genes that govern infection and drug sensitivity. The outcome will expand the ways in which new antifungal drugs can be developed and tested.

描述（由申请人提供）：我们的目标是开发一种简单、系统的白色念珠菌蛋白-蛋白相互作用测定方法。这种生物是人类的主要侵袭性真菌病原体，随着分子和基因组技术和资源的进步，它已成为越来越多的机制研究的焦点。越来越多的证据表明，许多独特的调控途径支配着白色念珠菌生长和致病性的重要方面。蛋白质-蛋白质相互作用的研究对其他生物的途径分析至关重要，但白色念珠菌的相关方法落后于其他发展。我们开发了一种新的蛋白质-蛋白质相互作用测试，即囊泡捕获相互作用（VCI）试验，该试验采用高度保守的真核生物机制和最小的遗传操作。通过荧光融合蛋白在核内体表面的定向定位来检测相互作用，产生点状荧光信号。通过计算方法对图像进行评估，以限制解释中的观察者偏差。VCI检测在酿酒酵母菌和白色念珠菌中检测两种蛋白对之间的相互作用。我们建议开发一个广泛适用的白色念珠菌VCI检测平台，包括菌株，载体，分析软件，以及对控制检测的基因表达参数的基本理解。白色念珠菌调控途径的VCI分析将为治疗方法的开发和对致病性的机制理解开辟新的途径。检测成分在所有已知真核生物中的保存表明，VCI检测也可能被输入到其他真核病原体中。公共卫生相关性：白色念珠菌是人类主要的侵袭性真菌病原体，可引起致命的深部组织感染和严重的粘膜感染。该项目将实施一种新的方法来鉴定控制感染和药物敏感性的白色念珠菌基因。这一结果将扩大开发和测试新型抗真菌药物的途径。