Analysis Of Mechanisms Of Testicular Toxicity Using DNA Microarray Technology

利用 DNA 微阵列技术分析睾丸毒性机制

• 批准号: 7968105
• 负责人: EDWARD MITCHELL EDDY
• 金额: $ 8.59万
• 依托单位: NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES
• 依托单位国家: 美国
• 资助国家: 美国
• 起止时间: 至
• 项目状态: 未结题
• 来源: https://reporter.nih.gov/project-details/7968105
• 关键词: A Mouse; Arsenic; Cadmium; Cells; Chemicals; Custom; DNA Microarray Chip; Databases; Deposition; Development; Dose; Endocrine; Exposure to; Expressed Sequence Tags; Gene Expression; Genes; Germ Cells; Goals; Individual; Injury; Late Effects; Lesion; Messenger RNA; Microarray Analysis; Mus; Pattern; Staging; Testis; Time; Toxic effect; cDNA Library; cell type; knockout gene; male; mouse genome; reproductive; response; toxicant

Changes in patterns of gene expression in the testis in response to cadmium and arsenic, known male reproductive toxicants are being used to: 1) identify primary and secondary gene responses to the toxicants, 2) to identify the initial target cell of the toxicants in the testis, and 3) to use the temporal pattern of changes in gene expression to define the mechanisms of toxicity. A mouse testis microarray has been developed and is being used in these studies. It also will be useful for studies of effects of gene knockouts, endocrine manipulations, and other treatments. Eight cDNA libraries constructed with mRNA from mouse testis and germ cells isolated at different stages of development were subjected to single-pass sequencing from the 5' end to identify clones to be used for this purpose. Over 28,000 clones were sequenced and over 22,000 ESTs were deposited in public databases. A mouse testis 22K microarray has been constructed using this sequence information and other information public databases. A comparison of the information gained from using the testis microarray and a whole mouse genome microarray has determined that a substantially larger number of genes on the testis microarray are seen to undergo changes in expression following cadmium treatment than are seen on the whole mouse genome microarray.

睾丸中基因表达模式的变化对镉和砷（已知的雄性生殖毒物）的反应被用于：1）鉴定对毒物的初级和次级基因反应，2）鉴定睾丸中毒物的初始靶细胞，3）使用基因表达变化的时间模式来确定毒性机制。 一种小鼠睾丸微阵列已经开发出来，并正在这些研究中使用。 它也将是有用的基因敲除，内分泌操纵和其他治疗的影响的研究。 用从小鼠睾丸和不同发育阶段分离的生殖细胞的mRNA构建的8个cDNA文库从5'端进行单程测序，以鉴定用于此目的的克隆。 超过28，000个克隆被测序，超过22，000个EST被保存在公共数据库中。 利用该序列信息和公共数据库中的其他信息构建了小鼠睾丸22K基因芯片。 通过比较使用睾丸微阵列和全小鼠基因组微阵列获得的信息，已经确定，在镉处理后，睾丸微阵列上的基因数量明显多于在全小鼠基因组微阵列上的基因数量。