Characterization of novel subcellular structures in Arabidopsis thaliana

拟南芥新型亚细胞结构的表征

• 批准号: 8148126
• 负责人: Ernest Y Kwok
• 金额: $ 14.5万
• 依托单位: CALIFORNIA STATE UNIVERSITY NORTHRIDGE
• 依托单位国家: 美国
• 财政年份: 2011
• 资助国家: 美国
• 起止时间: 2011-07-01 至 2014-06-30
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/8148126
• 关键词: Address; Amino Acid Sequence; Amino Acids; Arabidopsis; Bacteria; Binding; Biochemical Pathway; Biotechnology; Carbon; Cell Culture Techniques; Cell model; Cells; Centrifugation; Chemicals; Chloroplasts; Code; Collection; Communities; Complementary DNA; Cytosol; Economics; Endoplasmic Reticulum; Engineering; Environment; Enzymes; Fertilizers; Fluorescence; Fluorescence Microscopy; Fluorescence-Activated Cell Sorting; Food; Fossil Fuels; Future; Genetic Engineering; Goals; Golgi Apparatus; Green Fluorescent Proteins; Health; Human; Industrial Waste; Insertional Mutagenesis; Interphase Cell; Label; Light; Location; Macromolecular Complexes; Mammalian Cell; Membrane; Microscopy; Modification; Mouse-ear Cress; Nutrient; Organelles; Pathway interactions; Peptide Hydrolases; Peptide Mapping; Peptide Sequence Determination; Pesticides; Pharmaceutical Preparations; Plant Model; Plant Physiology; Plant Proteins; Plants; Play; Production; Protein Engineering; Proteins; Proteomics; Role; Scientist; Screening procedure; Sequence Analysis; Signal Transduction; Site-Directed Mutagenesis; Solutions; Sorting - Cell Movement; Source; Spottings; Staging; Staining method; Stains; Structure; Subcellular structure; System; Tissues; Transgenes; Transgenic Organisms; Transgenic Plants; Trypsin; Two-Dimensional Gel Electrophoresis; Vacuole; Visual; Weight; base; cell type; drug production; improved; inhibitor/antagonist; interest; novel; peroxisome; planetary Atmosphere; plant genetics; protein expression; research study; tandem mass spectrometry; therapeutic protein; tool

DESCRIPTION (provided by applicant): Plant biotechnology has the potential to improve human health on a number of fronts. Plants can be engineered to produce therapeutic proteins as drugs. Crops can be genetically modified to produce food that is more nutritious and to require less chemical fertilizers and pesticides. Plants can also be engineered to clean up the environment or replace the fossil fuels that threaten the atmosphere. But one critical problem faced by plant biotechnology is the inability to produce large amounts of transgenic proteins in plant cells. This limitation is particularly challenging in the realm of drug production where the amount of protein produced by a plant influences the economic viability of the drug. One way to address the problem of low protein production in plants is to find new places in the plant cell to store engineered proteins. The goal of this proposal is to discover and characterize new compartments in the plant cell for accumulation of transgenic proteins. Currently, targeting proteins to the cytosol and membrane bound organelles like the endoplasmic reticulum results in only low concentrations of the protein per gram of plant tissue. This reduces the profitability of plant biotechnology when compared to other strategies like protein expression in bacteria and mammalian cell cultures. If successful, this project will identify new organelles or subcellular structures that will improve the efficiency of plant genetic engineering. The project will also determine how to target proteins to these new locations. In addition, this project may identify new biochemical pathways as targets for future plant genetic engineering. This project will begin by looking for new organelles in the model plant Arabidopsis thaliana. A set of 108 unique transgenic Arabidopsis have been produced that express different fusions between the green fluorescent protein (GFP) and random plant proteins (1). These random proteins serve as targeting signals to send the GFP to different intracellular compartments. In some cases, the GFP has been found to accumulate in regions of the cell never before observed by plant biologists. This project will aim to characterize these new organelles and how proteins can be targeted to them. The initial screening stage of this project will use fluoresce microscopy to identify candidate plants in which GFP lights up new structures in the plant cell. The transgenes will then be cloned out of the candidate lines to determine what protein sequences are targeting the GFP to their particular locations. This sequence information will be used to determine the minimal requirements for targeting proteins to the new organelle. Finally, to fully characterize the organelles, they will be purified and analyzed for protein content by peptide fingerprinting. PUBLIC HEALTH RELEVANCE: Biotechnologists are genetically engineering plants to produce drugs, to increase nutrient content, to be grown cheaper using fewer chemicals, to clean up industrial wastes, and to produce carbon-neutral fuels. One of the biggest challenges faced by plant scientists is the inability to produce high levels of proteins in plant cells. This project will find new compartments within plant cells that will promote more efficient use of plants to improve human health.

描述(由申请人提供)：植物生物技术在许多方面具有改善人类健康的潜力。植物可以被改造成产生治疗性蛋白质作为药物。可以对农作物进行转基因，以生产更有营养的食物，并减少化肥和杀虫剂的使用量。植物也可以被改造成净化环境或取代威胁大气的化石燃料。但植物生物技术面临的一个关键问题是无法在植物细胞中产生大量转基因蛋白质。这一限制在药物生产领域尤其具有挑战性，因为在药物生产领域，植物产生的蛋白质数量会影响药物的经济可行性。解决植物蛋白质产量低的问题的一种方法是在植物细胞中寻找新的地方来储存工程蛋白质。这项建议的目标是发现和表征植物细胞中积累转基因蛋白的新隔间。目前，将蛋白质定位于细胞质和膜结合的细胞器，如内质网，每克植物组织只能产生低浓度的蛋白质。与细菌和哺乳动物细胞培养中的蛋白质表达等其他策略相比，这降低了植物生物技术的盈利能力。如果成功，该项目将识别新的细胞器或亚细胞结构，从而提高植物基因工程的效率。该项目还将确定如何将蛋白质定位到这些新的位置。此外，该项目可能会确定新的生化途径，作为未来植物基因工程的目标。该项目将首先在模式植物拟南芥中寻找新的细胞器。已经产生了108个独特的转基因拟南芥，它们表达了绿色荧光蛋白(GFP)和随机植物蛋白之间的不同融合(1)。这些随机蛋白质充当靶向信号，将GFP发送到不同的细胞内隔间。在某些情况下，GFP被发现在植物生物学家以前从未观察到的细胞区域积累。这个项目的目的是描述这些新细胞器的特征，以及如何将蛋白质定位于它们。该项目的初始筛选阶段将使用荧光显微镜来识别候选植物，在这些候选植物中，GFP可以照亮植物细胞中的新结构。然后，将从候选品系中克隆出转基因，以确定哪些蛋白质序列将针对其特定位置的GFP。这些序列信息将被用来确定将蛋白质定向到新细胞器的最低要求。最后，为了充分确定细胞器的特征，将对它们进行纯化，并通过多肽指纹图谱分析蛋白质含量。 与公共健康相关：生物技术专家正在对植物进行基因改造，以生产药物，增加营养含量，使用更少的化学品变得更便宜，清理工业废物，并生产碳中性燃料。植物科学家面临的最大挑战之一是无法在植物细胞中产生高水平的蛋白质。该项目将在植物细胞中发现新的隔间，以促进更有效地利用植物来改善人类健康。