LANGEVIN DYNAMICS SIMULATION OF LIPID KINASE MUTATIONS IN CANCER
LANGEVIN DYNAMICS SIMULATION OF LIPID KINASE MUTATIONS IN CANCER
批准号:
8171866
负责人:
Rachel Karchin
金额:
$0.11万
依托单位国家:
美国
项目类别:
财政年份:
2010
资助国家:
美国
项目状态:
已结题
起止时间:
2010-08-01 至 2013-07-31
关键词:
Amino AcidsAutomobile DrivingComputer Retrieval of Information on Scientific Projects DatabaseFundingGrantGrowthHomologous GeneInstitutionLipidsMalignant NeoplasmsMolecularMutationPIK3CA genePIK3CG genePhosphotransferasesPlayProteinsResearchResearch PersonnelResourcesRoentgen RaysRoleRunningSourceStructureUnited States National Institutes of Healthlipid Imalignant breast neoplasmmutantsimulation
中文摘要
该子项目是利用
由NIH/NCRR资助的中心赠款提供的资源。子项目和
研究者(PI)可能从另一个NIH来源获得主要资金,
因此可以在其他CRISP条目中表示。列出的机构是
中心,不一定是研究者的机构。
脂质激酶突变在驱动癌症生长中起重要作用。我们建议探索潜在的分子机制的氨基酸改变突变的乳腺癌中看到的I类脂质激酶PIK 3CA使用其同系物,I类脂质激酶PIK 3CG的X-射线晶体结构。我们请求资源运行10 ns朗之万动力学模拟7突变体和3野生型结构与CHARMM阐明结构变化,产生异常,过度活跃的蛋白质在癌症中。
英文摘要
This subproject is one of many research subprojects utilizing the
resources provided by a Center grant funded by NIH/NCRR. The subproject and
investigator (PI) may have received primary funding from another NIH source,
and thus could be represented in other CRISP entries. The institution listed is
for the Center, which is not necessarily the institution for the investigator.
Lipid kinase mutations play an important role in driving cancer growth. We propose to explore the underlying molecular mechanisms of amino acid changing mutations seen in breast cancers in the Class I lipid kinase PIK3CA using the X-ray crystal structure of its homolog, the Class I lipid kinase PIK3CG. We request resources to run 10ns Langevin dynamics simulations of seven mutant and three wild-type structures with CHARMM to elucidate the structural changes that produce an abnormal, hyperactive protein in cancer.
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会议论文
OpenCRAVAT: Informatics Tools for High-Throughput Analysis of Cancer Mutations
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批准号:10418133
-
项目类别:
-
资助金额:$67.97万
-
财政年份:2022
-
负责人:Rachel Karchin
-
依托单位:
OpenCRAVAT: Informatics Tools for High-Throughput Analysis of Cancer Mutations
-
批准号:10617371
-
项目类别:
-
资助金额:$65.31万
-
财政年份:2022
-
负责人:Rachel Karchin
-
依托单位:
Informatics Tools for High-throughput Analysis of Cancer Mutations
-
批准号:9094143
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项目类别:
-
资助金额:$46.28万
-
财政年份:2016
-
负责人:Rachel Karchin
-
依托单位:
Informatics Tools for High-throughput Analysis of Cancer Mutations
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批准号:8606625
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项目类别:
-
资助金额:$29.0万
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财政年份:2013
-
负责人:Rachel Karchin
-
依托单位:
Informatics Tools for High-throughput Analysis of Cancer Mutations
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批准号:8735910
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项目类别:
-
资助金额:$31.71万
-
财政年份:2013
-
负责人:Rachel Karchin
-
依托单位:
Tools for detecting biologically important sequence variation in cancer
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批准号:8333965
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项目类别:
-
资助金额:$11.37万
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财政年份:2011
-
负责人:Rachel Karchin
-
依托单位:
AN INTEGRATED APPROACH TO PREDICTING ONCOGENIC MUTATIONS IN NOVEL BREAST CANCER
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批准号:8364289
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项目类别:
-
资助金额:$0.11万
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财政年份:2011
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负责人:Rachel Karchin
-
依托单位:
LANGEVIN DYNAMICS SIMULATION OF LIPID KINASE MUTATIONS IN CANCER
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批准号:8364284
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项目类别:
-
资助金额:$0.11万
-
财政年份:2011
-
负责人:Rachel Karchin
-
依托单位:
Tools for detecting biologically important sequence variation in cancer
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批准号:8113745
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项目类别:
-
资助金额:$26.97万
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财政年份:2011
-
负责人:Rachel Karchin
-
依托单位:
AN INTEGRATED APPROACH TO PREDICTING ONCOGENIC MUTATIONS IN NOVEL BREAST CANCER
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批准号:8171895
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项目类别:
-
资助金额:$0.11万
-
财政年份:2010
-
负责人:Rachel Karchin
-
依托单位:
AN INTEGRATED APPROACH TO PREDICTING ONCOGENIC MUTATIONS IN NOVEL BREAST CANCER
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批准号:7956356
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项目类别:
-
资助金额:$0.08万
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财政年份:2009
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负责人:Rachel Karchin
-
依托单位:
LANGEVIN DYNAMICS SIMULATION OF LIPID KINASE MUTATIONS IN CANCER
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批准号:7956250
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项目类别:
-
资助金额:$0.08万
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财政年份:2009
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负责人:Rachel Karchin
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依托单位:
Tools for Large-Scale Analysis of Driver Pathways
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批准号:7540176
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项目类别:
-
资助金额:$22.14万
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财政年份:2008
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负责人:Rachel Karchin
-
依托单位:
LANGEVIN DYNAMICS SIMULATION OF LIPID KINASE MUTATIONS IN CANCER
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批准号:7723391
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项目类别:
-
资助金额:$0.05万
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财政年份:2008
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负责人:Rachel Karchin
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依托单位:
Tools for Large-Scale Analysis of Driver Pathways
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批准号:7684197
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项目类别:
-
资助金额:$18.45万
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财政年份:2008
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负责人:Rachel Karchin
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依托单位:
Predicting Impact of Mutations on Proteins
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批准号:6837928
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项目类别:
-
资助金额:$4.3万
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财政年份:2004
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负责人:Rachel Karchin
-
依托单位:
Predicting Impact of Mutations on Proteins
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批准号:6949745
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项目类别:
-
资助金额:$4.83万
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财政年份:2004
-
负责人:Rachel Karchin
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依托单位:
海外基金