Copper-Induced Amyloidosis Studied by Mass Spectrometry

通过质谱研究铜诱导的淀粉样变性

• 批准号: 8292025
• 负责人: RICHARD W VACHET
• 金额: $ 18.56万
• 依托单位: UNIVERSITY OF MASSACHUSETTS AMHERST
• 依托单位国家: 美国
• 财政年份: 2005
• 资助国家: 美国
• 起止时间: 2005-07-01 至 2013-07-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/8292025
• 关键词: Alzheimer' s Disease; Amino Acids; Amyloid; Amyloid Fibrils; Amyloidosis; Binding; Charge; Complement; Copper; Data; Detection; Deuterium; Dialysis procedure; Disease; Dissociation; Electron Transport; Electrospray Ionization; Human; Individual; Label; Mass Spectrum Analysis; Measurement; Metals; Methods; Modeling; Molecular; Non-Insulin-Dependent Diabetes Mellitus; Outcomes Research; Parkinson Disease; Play; Procedures; Process; Proteins; Reaction; Reagent; Research; Resolution; Role; Solvents; Staging; Structure; Study models; System; Techniques; Therapeutic; amyloid fibril formation; amyloid formation; base; design; dimer; human disease; in vivo; insight; monomer; oxidation; protein oligomer; therapeutic development; tool

An increasing number of proteins are known to form amyloid fibrils in vivo, and the formation of these fibrils is implicated in several diseases (e.g. Alzheimer's, Parkinson's). One of these proteins, human ¿-2-microglobulin (¿2m), can form amyloid fibrils in the presence of Cu(II), and these fibrils are presumed to be the main pathogenic process underlying dialysis- related amyloidosis (DRA). Like other amyloid systems, ¿2m fibril formation proceeds by partial protein unfolding, subsequent oligomerization, and eventual elongation to form mature fibrils. While many aspects of general amyloid formation are understood, molecular-level information is lacking for the early stages of almost all amyloid forming reactions; however, this information is critical for the rational development of therapeutics against amyloid diseases like DRA. We intend to obtain amino acid-level information about the unfolding and oligomerization of ¿2m that precedes its fibril formation. To do so, we will develop, optimize, and apply three mass spectrometry (MS)-based methods with the necessary temporal and spatial resolution. (1) A new metal-catalyzed oxidation (MCO) induced deuterium labeling strategy will be investigated to complement our existing MCO/MS method. The proposed MCO-induced deuterium labeling strategy will provide Cu-¿2m binding data that are more easily interpreted, contain more information about all the Cu-bound amino acids, and are less prone to false positives. (2) Covalent labeling with MS detection will be used to study changes in ¿2m structure upon Cu(II) binding, unfolding, and oligomerization. The covalent labeling reactions will identify changes to the solvent accessibility of different amino acids in ¿2m as this protein progresses from monomer to oligomers. (3) Electrospray ionization (ESI) with top-down sequencing will be explored as a means to separate and characterize protein oligomers formed by ¿2m. The differential charging that occurs during ESI of protein oligomers will be used to rapidly separate protein oligomers, and top-down sequencing will be used to identify the solvent accessible amino acid residues that are labeled in individual oligomers. Our preliminary data on ¿2m fibril formation support a model in which Cu(II) is necessary to organize the dimer and an initial tetramer but is released upon formation of a second tetramer and the hexamer. We will use these three MS-based methods to study this model and identify the structural changes associated with the formation of each oligomeric state.

已知越来越多的蛋白质在体内形成淀粉样原纤维， 这些原纤维的形成涉及几种疾病（例如阿尔茨海默氏症、帕金森氏症）。之一 这些蛋白质，即人类<$2-微球蛋白（<$2m），在存在以下物质的情况下可以形成淀粉样纤维： Cu（II），这些纤维被认为是透析的主要致病过程- 相关淀粉样变性（amyloidosis，AMY）。与其他淀粉样系统一样，约2 m纤维的形成是通过部分 蛋白质解折叠、随后的寡聚化和最终的伸长以形成成熟的原纤维。 虽然一般淀粉样蛋白形成的许多方面都已被理解，但分子水平的信息还不清楚。 缺乏几乎所有淀粉样蛋白形成反应的早期阶段;然而， 这对于合理开发针对淀粉样蛋白疾病（如糖尿病）的治疗方法至关重要。我们 目的是获得关于<$2m的解折叠和寡聚化的氨基酸水平信息， 在纤维形成之前。为此，我们将开发，优化和应用三个质量 光谱（MS）为基础的方法与必要的时间和空间分辨率。 (1)一种新的金属催化氧化（MCO）诱导的氘标记策略， 研究以补充我们现有的MCO/MS方法。建议的MCO诱导 氘标记策略将提供更容易解释的Cu-2 m结合数据， 包含更多关于所有Cu结合氨基酸的信息，并且不太容易被错误识别。 积极的。(2)采用MS检测的共价标记将用于研究约2个月的变化 在Cu（II）结合、解折叠和寡聚化后的结构。共价标记反应将 确定不同氨基酸的溶剂可及性的变化， 从单体到低聚物。(3)自顶向下电喷雾离子化（ESI） 将探索测序作为分离和表征形成的蛋白质寡聚体的手段 2 M的。在蛋白质低聚物的ESI过程中发生的差分充电将用于 快速分离蛋白质寡聚体，并使用自上而下的测序来鉴定溶剂 在单个寡聚体中标记的可接近的氨基酸残基。 我们关于<$2米纤维形成的初步数据支持一个模型，其中Cu（II）是必要的 以组织二聚体和初始四聚体，但在形成第二个四聚体时释放 和六聚体我们将使用这三种基于MS的方法来研究这个模型， 与每个低聚状态的形成相关的结构变化。