Baylor-Johns Hopkins Center for Mendelian Genetics
Baylor-Johns Hopkins Center for Mendelian Genetics
批准号:
8601122
负责人:
DAVID VALLE
金额:
$389.07万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2011
资助国家:
美国
项目状态:
已结题
起止时间:
2011-12-05 至 2015-11-30
关键词:
AffectBiologicalClinicalCommunitiesComputer AnalysisComputer softwareConsanguinityCopy Number PolymorphismCountryDNADataData AnalysesData LinkagesDatabasesDetectionDiagnosisDiseaseE-learningEducational workshopFailureFamilyGene MutationGenesGeneticGenetic ProgrammingGenomeGenomicsGenotypeHandHereditary DiseaseHumanHuman GeneticsIndividualInstitutionLaboratoriesLeukocytesMedicalMedicineMethodsMolecularMolecular AnalysisMonitorMutationNatureOnline Mendelian Inheritance In ManOnline SystemsPatientsPhenotypeProductionPublic DomainsRare DiseasesRecruitment ActivityRelative (related person)Research PersonnelResourcesReview CommitteeSamplingSequence AnalysisSoftware ToolsTechnologyTrainingUniversitiesVariantadjudicationbasecollegedisease classificationexomeexome sequencingfamily structuregenetic analysisgenetic variantgenome sequencinggenome-wideimprovedmedical schoolsmeetingsprobandprogramsprotein structuresegregationtraitweb based interfaceweb site
中文摘要
虽然,识别孟德尔疾病的基因和变异的生物学和医学价值是非常高的,但其中绝大多数在分子水平上仍然无法解释。为此,我们将在贝勒医学院(BCM)和约翰霍普金斯大学医学院(JHUSOM)这两个美国历史最悠久、最具成就的人类遗传学项目之间建立合作关系,组建贝勒-霍普金斯孟德尔基因组学中心(BHCMG)。在这样做的过程中,我们将充分利用我们对OMIM的全面访问,以及通过结合我们在临床遗传学、基因组技术、遗传分析和了解遗传病的生物学基础方面的专业知识所提供的协同效应。我们将迎接寻找和招募代表这些罕见疾病的样本的挑战,通过创建和利用一个由同事和前学员组成的全球网络来识别和招募数千名患有无法解释的孟德尔表型或未确诊疾病的患者和家庭,这些疾病在他们的家庭中作为孟德尔特征分离。在我们的两个机构中,我们已经有了2000个DNA样本,并在我们全球17个合作者的网络中鉴定了12000个DNA样本。此外,我们已经制定了利用OMIM(每天10万次独特点击)标记无法解释的表型和招募样本的策略。我们将进一步组织我们的工作,建立一个样本和疾病跟踪数据库,该数据库与OMIM和BHCMG网站相结合并可通过该数据库访问,并已组建了一个专家委员会,协助处理不可避免的ELSI问题。我们将在现有的高通量基因分型和测序管道的基础上开发一个综合实验室,我们将使用来自两个机构的专家委员会和外部专家来分析数据并开发新的软件工具来推进该领域。最后,为了传播表型和分子信息,我们将遵循一项积极的计划,利用OMIM和其他基于网络的资源进行数据传播,并组织一年一度的孟德尔遗传学会议向所有人开放。
英文摘要
Although, the biological and medical value of identifying the genes and variants responsible for Mendelian disorders is extraordinarily high, the vast majority of these remain unexplained at the molecular level. To this end, we will create a partnership between two of the oldest and most accomplished human genetics programs in the country, those at Baylor College of Medicine (BCM) and Johns Hopkins University School of Medicine (JHUSOM), to form the Baylor-Hopkins Center for Mendelian Genomics (BHCMG). In doing so, we will take advantage of our complete access to OMIM and of the synergies afforded by combining our expertise in clinical genetics, genomic technologies, genetic analysis and understanding the biological basis of genetic disease. We will meet the challenge of finding and recruiting samples representing these rare disorders by creating and utilizing a worldwide network of colleagues and former trainees to identify and recruit thousands of patients and families with unexplained Mendelian phenotypes or with undiagnosed disease that segregates in their families as Mendelian traits. We already have >2,000 DNA samples in hand at our two institutions and have identified > 12,000 DNA samples in our network of 17 collaborators around the world. Moreover, we have developed strategies to utilize OMIM (>10, 000 unique hits/day) to flag unexplained phenotypes and recruit samples. We will further organize our efforts by building a sample and disease-tracking database that is integrated with and accessible through OMIM as well as through a BHCMG web site and have assembled a committee of experts to assist with the inevitable ELSI issues. We will build on our existing high throughput genotyping and sequencing pipelines to develop an integrated laboratory effort and we will use a committee of experts from both institutions plus outside experts to analyze the data and develop new software tools to advance the field. Finally, to disseminate the phenotypic and molecular information we will follow an aggressive plan of data dissemination using OMIM and other web-based resources as well as organizing an annual Mendelian genetics meeting open to all.
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Genetics Core
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批准号:8931785
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项目类别:
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资助金额:$14.41万
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财政年份:2014
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负责人:DAVID VALLE
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依托单位:
Baylor-Johns Hopkins Center for Mendelian Genetics
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批准号:8237388
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项目类别:
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资助金额:$400.0万
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财政年份:2011
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负责人:DAVID VALLE
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依托单位:
Baylor-Johns Hopkins Center for Mendelian Genetics
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批准号:8845225
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项目类别:
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资助金额:$387.09万
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财政年份:2011
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负责人:DAVID VALLE
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依托单位:
Baylor Johns Hopkins Center for Mendelian Genetics
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批准号:9269870
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项目类别:
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资助金额:$22.06万
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财政年份:2011
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负责人:DAVID VALLE
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依托单位:
Baylor Johns Hopkins Center for Mendelian Genetics
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批准号:9923273
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项目类别:
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资助金额:$231.89万
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财政年份:2011
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负责人:DAVID VALLE
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依托单位:
Baylor-Johns Hopkins Center for Mendelian Genetics
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批准号:8393220
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项目类别:
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资助金额:$379.16万
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财政年份:2011
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负责人:DAVID VALLE
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依托单位:
Baylor Johns Hopkins Center for Mendelian Genetics
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批准号:9047798
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项目类别:
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资助金额:$309.99万
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财政年份:2011
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负责人:DAVID VALLE
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依托单位:
Core C
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批准号:8080402
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项目类别:
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资助金额:$12.7万
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财政年份:2010
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负责人:DAVID VALLE
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依托单位:
JH/CIDR Genotyping for Genome-Wide Association Studies
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批准号:7479370
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项目类别:
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资助金额:$247.78万
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财政年份:2007
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负责人:DAVID VALLE
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依托单位:
Genotyping for Studying the Genetic Contributions to Human Disease
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批准号:7941280
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项目类别:
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资助金额:$1125.55万
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财政年份:2007
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负责人:DAVID VALLE
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依托单位:
JH/CIDR Genotyping for Genome-Wide Association Studies
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批准号:7929667
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项目类别:
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资助金额:$295.53万
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财政年份:2007
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负责人:DAVID VALLE
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依托单位:
JH/CIDR Genotyping for Genome-Wide Association Studies
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批准号:8332915
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项目类别:
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资助金额:$100.0万
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财政年份:2007
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负责人:DAVID VALLE
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依托单位:
JH/CIDR Genotyping for Genome-Wide Association Studies
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批准号:7502429
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项目类别:
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资助金额:$549.63万
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财政年份:2007
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负责人:DAVID VALLE
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依托单位:
JH/CIDR Genotyping for Genome-Wide Association Studies
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批准号:7690586
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项目类别:
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资助金额:$198.0万
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财政年份:2007
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负责人:DAVID VALLE
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依托单位:
HIGH THROUGHPUT GENOTYPING FOR STUDING THE GENETIC CONTRIBUTIONS TO HUMAN DISEAS
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批准号:7542695
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项目类别:
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资助金额:$2137.96万
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财政年份:2007
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负责人:DAVID VALLE
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依托单位:--
JH/CIDR Genotyping for Genome-Wide Association Studies
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批准号:7676239
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项目类别:
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资助金额:$160.55万
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财政年份:2007
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负责人:DAVID VALLE
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依托单位:
JH/CIDR Genotyping for Genome-Wide Association Studies
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批准号:7693055
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项目类别:
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资助金额:$126.2万
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财政年份:2007
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负责人:DAVID VALLE
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依托单位:
CIDR Genotyping
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批准号:7978581
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项目类别:
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资助金额:$46.92万
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财政年份:2007
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负责人:DAVID VALLE
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依托单位:
JH/CIDR Genotyping for Genome-Wide Association Studies
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批准号:7942285
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项目类别:
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资助金额:$193.25万
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财政年份:2007
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负责人:DAVID VALLE
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依托单位:
JH/CIDR Genotyping for Genome-Wide Association Studies
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批准号:7327916
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项目类别:
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资助金额:$352.15万
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财政年份:2007
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负责人:DAVID VALLE
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依托单位:
海外基金