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The role of BARHL2 in the mosaic pattering and dendritic tiling of retinal amacri

BARHL2 在视网膜 amacri 的马赛克图案和树突状平铺中的作用

基本信息

批准号：
8719121
负责人：
Lin Gan
金额：
$ 18.8万
依托单位：
UNIVERSITY OF ROCHESTER
依托单位国家：
美国
项目类别：
财政年份：
2013
资助国家：
美国
起止时间：
2013-09-01 至 2015-08-31
项目状态：
已结题

来源：
https://reporter.nih.gov/project-details/8719121
关键词：
Address Amacrine Cells Axon Blindness Cell Adhesion Molecules Cell Differentiation process Cells ChIP-seq Characteristics Coupled Defect Dendrites Development Down Syndrome Cell Adhesion Molecule Drosophila genus Dyes Ensure Event Exhibits Failure Foundations Future Ganglion Cell Layer Gene Expression Profile Gene Targeting Genes Genetic Individual Injection of therapeutic agent Inner Nuclear Layer Label Link Massive Parallel Sequencing Molecular Morphology Mus Mutant Strains Mice Nervous System Physiology Nervous system structure Neurites Neurons Pathway interactions Pattern Phenotype Play Process Property Protein Kinase Recovery Regulatory Pathway Research Retina Retinal Role Sensory Shotgun Sequencing Staging Structure Technology Time Vision cell type cholinergic chromatin immunoprecipitation density ganglion cell gene discovery homeodomain neural circuit neuronal cell body novel public health relevance response retinal neuron transcription factor transcriptome sequencing visual information

项目摘要

DESCRIPTION (provided by applicant): Our accurate vision depends on the flow of visual information through precisely wired connections between axons and dendrites of different retinal neurons. In the retina, neurons occupy spatial domains and arborize their dendrites, which require the proper distribution of their cell bodies and dendritic arbors. Cell bodies of the same type of neurons are spaced out in a process called mosaic patterning, and their dendrites establish a zone within which other cells of the same type are excluded, a process called tiling. In addition, the neurites from an individual cell display self-avoidance properties. In contrast to the excellent progress made in discovering genes and mechanisms of retinal cell fate determination and differentiation, relatively little is known about the molecular mechanisms underlying the mosaic patterning and tiling processes in the retina as well as in other nervous systems. Not until recently, studies show that in mice mutant for Down syndrome cell adhesion molecule (DSCAM), DSCAM-LIKE1 (DSCAML1), MEG10, and PCDH, certain types of retinal amacrine and ganglion cells exhibit defects in the spacing of cell bodies and in the dendritic arborization, which begins to implicate the roles of unique classes of cell adhesion molecules (CAMs) in regulating these processes in the vertebrate retina. Nevertheless, we have yet to uncover the other molecules involved in these processes in each of the nearly 80 retinal cell types and subtypes, and more importantly, to identify and characterize the entire genes and genetic pathways that govern the formation of functional neural circuitry. In the past, this question has been hard to address due to the lack of a suitable molecule. Here, we show that in mice lacking BARHL2, a BAR-homeodomain transcription factor, starburst amacrine cells in the ganglion cell layer have aggregated dendrites and clumped cell bodies, indicating Barhl2's role in self-avoidance. Being the first transcription factor implicated in neuronal mosaic patterning and tiling processes, BARHL2 offers a unique opportunity to ultimately identify genetic pathways of neuronal mosaic patterning and tiling formation. In this proposal, we will fully characterize th mosaic patterning and tiling phenotypes of starburst amacrine cells in the ganglion cell layer of the Barhl2-null retina. Second, to recover the genetic pathway of self-avoidance, we will perform RNA-Seq of Barhl2 wild type and null starburst amacrine cells and BARHL2 ChIP-Seq to screen for downstream target genes of Barhl2 and to identify the transcriptional network regulating the tiling and mosaic patterning processes of starburst amacrine cells. Together, these studies will define the role of Barhl2 in regulating the tiling and mosaic patterning processes of starburst amacrine cells and elucidate the transcriptional events that occur downstream of Barhl2.

描述(申请人提供)：我们的准确视觉依赖于不同视网膜神经元的轴突和树突之间精确的有线连接的视觉信息流。在视网膜中，神经元占据空间域并树枝状分布，这需要它们的胞体和树突的适当分布。同一类型神经元的细胞体在一种称为镶嵌图案的过程中被隔开，它们的树突建立了一个区域，在该区域内排除了其他相同类型的细胞，这一过程被称为瓦片。此外，单个细胞的神经突起表现出自我回避特性。与之形成鲜明对比的是尽管在发现视网膜细胞命运决定和分化的基因和机制方面取得了很好的进展，但对视网膜和其他神经系统中镶嵌图案和瓷砖过程的分子机制知之甚少。直到最近，研究表明，在唐氏综合征细胞黏附分子(DSCAM)、DSCAM-like 1(DSCAML1)、MEG10和PCDH突变的小鼠中，某些类型的视网膜无长突细胞和神经节细胞表现出细胞体间距和树突树枝的缺陷，这开始暗示独特类型的细胞黏附分子(CAM)在调节脊椎动物视网膜的这些过程中所起的作用。然而，我们还没有在近80种视网膜细胞类型和亚型中发现参与这些过程的其他分子，更重要的是，识别和表征控制功能神经电路形成的整个基因和遗传路径。在过去，由于缺乏合适的分子，这个问题很难解决。在这里，我们展示了在缺乏BARHL2(BAR同源结构域转录因子)的小鼠中，神经节细胞层的星爆无长突细胞具有聚集的树突和成团的细胞体，表明BARHL2的S在自我回避中发挥作用。作为第一个涉及神经元镶嵌图案化和瓦片过程的转录因子，BARHL2为最终确定神经元镶嵌图案化和瓦片形成的遗传途径提供了一个独特的机会。在这项提案中，我们将充分描述Barhl2缺失视网膜神经节细胞层中星爆无长突细胞的马赛克图案和瓦片表型。其次，为了恢复自我回避的遗传途径，我们将通过对Barhl2野生型和空星爆无长突细胞的RNA-Seq和BARHL2芯片-序列来筛选Barhl2的下游靶基因，并鉴定调控星爆无长突细胞的拼接和镶嵌图案过程的转录网络。总之，这些研究将确定Barhl2在调节星爆无长突细胞的拼贴和镶嵌图案过程中的作用，并阐明Barhl2下游发生的转录事件。