High Altitude Adaptation: A Model for Chronic Hypoxia

高海拔适应：慢性缺氧模型

• 批准号: 8606645
• 负责人: FRANK S LEE
• 金额: $ 22万
• 依托单位: UNIVERSITY OF PENNSYLVANIA
• 依托单位国家: 美国
• 财政年份: 2014
• 资助国家: 美国
• 起止时间: 2014-03-01 至 2016-02-29
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/8606645
• 关键词: Acute; Adverse effects; Aerobic; Alleles; Altitude; Attenuated; Biological Assay; Catalytic Domain; Cell Count; Cell Culture Techniques; Cerebrovascular Disorders; Chronic; Chronic Obstructive Airway Disease; DNA; Disease; Erythrocytes; Erythrocytoses; Functional RNA; Gene Proteins; Gene Targeting; Genes; Genetic; Genomics; Haplotypes; Hematocrit procedure; Homeostasis; Hydroxylation; Hypertension; Hypoxia; Hypoxia Inducible Factor; Hypoxia-Inducible Factor Pathway; In Vitro; Knowledge; Life; Lung; Mediating; Metabolism; Modeling; Mus; Mutation; Myocardial Ischemia; Oxygen; Pathway interactions; Patients; Phase; Phenotype; Physiological; Population; Population Study; Procollagen-Proline Dioxygenase; Protein Isoforms; Proteins; Pulmonary Hypertension; Regulation; Reporter Genes; Sampling; Sea; Series; Single Nucleotide Polymorphism; Therapeutic; Translating; bHLH-PAS factor HLF; base; gain of function; genetic variant; genome wide association study; hypoxia inducible factor 1; in vitro Assay; loss of function; meter; novel therapeutic intervention; protein protein interaction; public health relevance; respiratory; response; screening; sensor; transcription factor

DESCRIPTION (provided by applicant): Chronic hypoxia is a central feature of many diseases, including ischemic heart disease, cerebrovascular disease, and chronic obstructive pulmonary disease. Understanding the cellular and physiologic responses to chronic hypoxia will provide the basis for therapies for these widely prevalent diseases. The central transcriptional response to hypoxia is mediated by the Prolyl Hydroxylase Domain (PHD):Hypoxia Inducible Factor (HIF) pathway. In this pathway, PHD (which consists of three isoforms) prolyl hydroxylates the ? subunit of HIF (which consists of three isoforms) and targets the latter for degradation. Under hypoxia, PHD activity is attenuated, allowing for the stabilization of HIF-? and the activation of a broad range of genes involved in hypoxic adaptation, such as ones that promote a shift from aerobic to anaerobic metabolism. One might presume that activation of this pathway would be of direct benefit in these diseases. However, it is clear that chronic activation of this pathway leads to two potentially serious adverse effects, pulmonary hypertension and erythrocytosis. Therapeutic manipulation of this pathway mandates identifying means of tempering these adverse effects. Study of the Tibetan population, who have adapted to high altitudes and chronic hypoxia, offers a unique opportunity to pursue this. Strikingly, this population has avoided the pulmonary hypertension and erythrocytosis that afflict low altitude dwellers who ascend to high altitudes. Hence, if one were able to identify the mechanisms by which this occurs, this would allow approaches that could ameliorate these consequences. A large number of independent genome wide studies of the Tibetan population have recently provided convincing evidence for a genetic basis for this adaptation, and they consistently point to two genes, the PHD2 (also known as EGLN1) and HIF2A (also known as EPAS1) genes. In this application, we will focus on the PHD2 gene. The above referenced studies have identified a series of intronic and exonic single nucleotide polymorphisms (SNPs) that are enriched in the Tibetan population. In the initial R21 phase of the proposed project, we will first identify the functionally important SNP through a series of in vitro assays that will include reporter gene, protein:protein interaction, and cell culture-based assays. In the subsequent R33 phase of the proposed project, we will generate a mouse knockin line to model the Tibetan SNP. We will then examine the capacity of this SNP to ameliorate the pulmonary hypertension and erythrocytosis that is seen in two independent models of chronic hypoxia. In one model, we will expose these mice to hypoxia for three weeks. In the second model, we will cross these mice with a recently generated mouse line bearing a knockin Hif2a mutation that displays highly penetrant erythrocytosis and pulmonary hypertension. We anticipate that the proposed studies will identify a pathway by which the hypoxic response can be engaged while minimizing its most serious adverse effects.

描述(申请人提供)：慢性缺氧是许多疾病的中心特征，包括缺血性心脏病、脑血管疾病和慢性阻塞性肺疾病。了解慢性缺氧的细胞和生理反应将为治疗这些广泛流行的疾病提供基础。低氧诱导因子(HIF)途径介导了细胞对低氧的中枢转录反应。在这个途径中，PHD(由三种异构体组成)使？低氧诱导因子的亚单位(由三种异构体组成)，并针对后者进行降解。在低氧条件下，PHD活性减弱，使HIF-？以及与低氧适应有关的广泛基因的激活，例如那些促进从有氧代谢向无氧代谢转变的基因。人们可能会认为，激活这一途径将在这些疾病中直接受益。然而，很明显，该通路的慢性激活会导致两种潜在的严重不良反应，即肺动脉高压和红细胞增多症。对这一途径的治疗操作要求确定缓和这些不利影响的方法。对适应高海拔和慢性低氧的藏族人口的研究，为探索这一问题提供了一个独特的机会。令人惊讶的是，这一人群避免了困扰攀升到高海拔地区的低海拔居民的肺动脉高压和红细胞增多症。因此，如果人们能够确定发生这种情况的机制，这将允许采取能够改善这些后果的方法。最近对藏族人群进行的大量独立的全基因组研究为这种适应的遗传基础提供了令人信服的证据，他们一直指出两个基因，PHD2(也称为EGLN1)和HIF2A(也称为EPAS1)基因。在本应用中，我们将重点介绍PHD2基因。上述研究已经确定了一系列在藏族人群中丰富的内含子和外显子单核苷酸多态(SNPs)。在拟议项目的初始R21阶段，我们将首先通过一系列体外分析确定功能重要的SNP，其中将包括报告基因、蛋白质：蛋白质相互作用和基于细胞培养的分析。在拟议项目的后续R33阶段，我们将生成一个鼠标敲击线来模拟西藏SNP。然后，我们将检查这种SNP改善在两种独立的慢性低氧模型中出现的肺动脉高压和红细胞增多的能力。在一个模型中，我们将这些小鼠暴露在低氧环境中三周。在第二个模型中，我们将把这些小鼠与最近产生的携带HIF2A基因突变的小鼠品系杂交，该突变显示出高穿透性红细胞增多症和肺动脉高压。我们预计，拟议的研究将确定一条途径，通过该途径可以进行低氧反应，同时将其最严重的不良影响降至最低。