Lifespan extension by differential translation mediated by eIF-4G in C. elegans
Lifespan extension by differential translation mediated by eIF-4G in C. elegans
批准号:
8794391
负责人:
ARIC N ROGERS
金额:
$24.14万
依托单位国家:
美国
项目类别:
财政年份:
2013
资助国家:
美国
项目状态:
已结题
起止时间:
2013-02-01 至 2017-01-31
关键词:
3&apos Untranslated RegionsAccountingAddressAgingAlternative SplicingAnimal ModelAttenuatedBindingBioinformaticsBiologicalBiological AssayBiological ModelsCaenorhabditis elegansCandidate Disease GeneCharacteristicsComputersData SetDevelopmentDiabetes MellitusDiseaseEukaryotic Initiation Factor-4GFrequenciesGene Expression ProfileGenesGeneticGenetic EpistasisGenetic TranslationGoalsHealthHumanLengthLifeLongevityLongevity PathwayMaintenanceMalignant NeoplasmsMammalsMass Spectrum AnalysisMediatingMentorsMentorshipMessenger RNAMethodsMicroRNAsModelingMonitorNematodaNerve DegenerationOpen Reading FramesOrthologous GenePlayProcessProtein BiosynthesisProteinsProteomeRNA SplicingRegulationRegulatory ElementReporterResearchResistanceRibosomesRoleScientistSequence AnalysisSmall RNASourceStarvationTestingTranscriptTransgenic AnimalsTranslatingTranslation InitiationTranslationsUntranslated RegionsYeastsabstractingage relatedaging geneattenuationbasebiological adaptation to stresscell typecomputerized data processingdeep sequencinggenetic manipulationgenome-widein vivoinformation gatheringmRNA Expressionnoveloverexpressiontool
中文摘要
6. 项目摘要/摘要
英文摘要
6. Project Summary / Abstract
Although inhibition of translation initiation extends lifespan from yeast to mammals, the mechanism
remains unknown. We showed that one of the most robust lifespan extension comes from suppression of ifg-1,
the C. elegans ortholog of eukaryotic translation initiation factor (eIF)-4G, a factor that positively regulates
translation. Previous studies have analyzed changes in total mRNA expression to investigate causes of
lifespan changes under a number of different genetic and environmental conditions. However, other studies
have shown large discrepancies between the transcriptome and proteome. I used translation state array
analysis (TSAA), which accounts for post-transcriptional processing, to investigate changes upon direct
modulation of translation by inhibiting ifg-1 expression. A large number of differentially translated mRNAs were
found and ontological analysis revealed that upregulated genes included stress response genes and aging
genes that are positive regulators of aging. Preliminary sequence analysis suggests that genes with
preferrentially maintained expression contain conserved characteristics known to modulate translation. qRT-
PCR and quantitative mass spectroscopy corroborate TSAA results. Hypothesis: in addition to reducing
global rates of translation, suppression of ifg-1 results in preferential translation of mRNA associated
with stress response and somatic maintenance based on mRNA composition. An epistasis screen of 50
translationally enhanced stress response genes showed 10 that are required for maximal lifespan extension
when ifg-1 is inhibited. I intend to a) directly determine translation changes and the impact of overexpression
for these seven genes using in vivo reporter constructs, b) analyze sequences for known or novel cis-
regulatory elements and isolate microRNAs (miRNAs) associated with differentially translated mRNAs, and c)
characterize the miRNA and cis-regulatory elements for their effects between conditions as well as their roles
in lifespan modulation.
期刊论文(1)
专著(0)
科研奖励(0)
会议论文
A Novel Caenorhabditis Elegans Proteinopathy Model Shows Changes in mRNA Translational Frameshifting During Aging.
一种新的秀丽隐杆线虫蛋白病模型显示衰老过程中 mRNA 翻译移码的变化。
DOI:
10.33594/000000067
发表时间:
2019
期刊:
Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology
影响因子:
--
作者:
[Adamla,Frauke, Rollins,Jarod, Newsom,Matthew, Snow,Santina, Schosserer,Markus, Heissenberger,Clemens, Horrocks,Jordan, Rogers,AricN, Ignatova,Zoya]
通讯作者:
Ignatova,Zoya
Modeling DR and mRNA translation to understand adaptive mechanisms that promote health
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批准号:10153619
-
项目类别:
-
资助金额:$37.35万
-
财政年份:2019
-
负责人:ARIC N ROGERS
-
依托单位:
Modeling DR and mRNA translation to understand adaptive mechanisms that promote health
-
批准号:10611984
-
项目类别:
-
资助金额:$37.35万
-
财政年份:2019
-
负责人:ARIC N ROGERS
-
依托单位:
Modeling DR and mRNA translation to understand adaptive mechanisms that promote health
-
批准号:10004550
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项目类别:
-
资助金额:$37.35万
-
财政年份:2019
-
负责人:ARIC N ROGERS
-
依托单位:
Translational regulation downstream of nutrient sensing in a model of Alzheimer's-related proteotoxicity
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批准号:10282045
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项目类别:
-
资助金额:$41.5万
-
财政年份:2019
-
负责人:ARIC N ROGERS
-
依托单位:
Modeling DR and mRNA translation to understand adaptive mechanisms that promote health
-
批准号:10398831
-
项目类别:
-
资助金额:$37.35万
-
财政年份:2019
-
负责人:ARIC N ROGERS
-
依托单位:
Lifespan extension by differential translation mediated by eIF-4G in C. elegans
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批准号:8610215
-
项目类别:
-
资助金额:$24.88万
-
财政年份:2013
-
负责人:ARIC N ROGERS
-
依托单位:
Lifespan extension by differential translation mediated by eIF-4G in C. elegans
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批准号:8601960
-
项目类别:
-
资助金额:$24.88万
-
财政年份:2013
-
负责人:ARIC N ROGERS
-
依托单位:
Lifespan extension by differential translation mediated by eIF-4G in C. elegans
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批准号:8113756
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项目类别:
-
资助金额:$8.83万
-
财政年份:2011
-
负责人:ARIC N ROGERS
-
依托单位:
Lifespan extension by differential translation mediated by eIF-4G in C. elegans
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批准号:8249401
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项目类别:
-
资助金额:$8.61万
-
财政年份:2011
-
负责人:ARIC N ROGERS
-
依托单位:
海外基金