3D structure and function of Acid Sensing Ion channels

酸敏离子通道的 3D 结构和功能

• 批准号: 9014020
• 负责人: David Malcom MacLean
• 金额: $ 8.67万
• 依托单位: UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON
• 依托单位国家: 美国
• 财政年份: 2015
• 资助国家: 美国
• 起止时间: 2015-09-30 至 2017-08-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/9014020
• 关键词: ASIC channel; Acute; Award; Awareness; Binding; Biological Assay; Biology; Biophysics; Brain; Cell Death; Cerebrum; Communities; Complex; Comprehension; Cryoelectron Microscopy; Data; Dependence; Disease; Drug Addiction; Electrophysiology (science); Environment; Event; Family; Fluorescence; Fright; Funding; Goals; Healthcare; Image; Injury; Instruction; Ion Channel Gating; Knock-out; Knowledge; Learning; Ligands; Location; Mediating; Memory; Methods; Molecular; Molecular Conformation; Mutate; Mutation; Nervous system structure; Neurobiology; Neurons; Outcome; Pain; Pharmaceutical Preparations; Phase; Physiological; Population; Positioning Attribute; Process; Protons; Reporting; Research; Resolution; Role; Seizures; Stroke; Structure; Synapses; Testing; Therapeutic; Toxin; Training; Translating; Work; base; desensitization; drug development; extracellular; insight; luminescence resonance energy transfer; operation; programs; protein purification; public health relevance; reconstruction; research study; response; sensor; stoichiometry; three dimensional structure

 DESCRIPTION (provided by applicant): In the brain, many pathophysiological events are accompanied by acidification of the extracellular environment. Unsurprisingly, neurons often show robust electrophysiological responses during such changes in extracellular pH. Acid sensing ion channels (ASICs) mediate the vast majority of these currents and the last few years have seen a substantial increase in our understanding of ASIC neurobiology. Because of this research, ASICs have been implicated in cell death following stroke, in pain, in fear related memory and in drug addiction amongst other disorders. However, we have not seen a corresponding surge in our understanding of how ASICs operate at a molecular level. Without such knowledge, we cannot translate our growing awareness of neurobiology into useful treatments. The candidate will combine his expertise in electrophysiology and fluorescence with new training in cryo-electron microscopy (cryo-EM) to bridge the gap between ASIC neurobiology and biophysics. This will be done through three Aims. During Specific Aim 1 in the K phase, the candidate will obtain high resolution cryo-EM structures of ASIC1a apo and desensitized states. New training in protein purification will be provided from Dr. Jayaraman and ASIC-specific advice from Dr. Gonzales. Dr. Serysheva will provide expert instruction in cryo-EM imaging and 3D reconstruction to a level where the candidate can perform the experiments independently. These structures will provide the first glimpse of the apo state and determine if steady-state desensitization (provoked by pH's near 7) is the same conformation as desensitization following activation (pH's near 5). The R phase will begin with Aim 2 where the candidate and his trainees will use concatenated subunits to determine the stoichiometry of activation and establish if conformational changes are concerted across subunits. In Aim 3, the candidate and his trainees will obtain high resolution cryo-EM images of heteromeric ASICs, the predominant population in the brain. This combination of functional information and structural data will help fulfill the candidates two near term goals of contributing essential insight into th fundamental operation of ASICs and emerging as a leader in the field of ASIC gating. Moreover, these studies will provide preliminary data to develop a competitive R01 application focusing on ASIC heteromeric structure and function. This K99/R00 award will also better position the candidate to satisfy the long term goals of rendering the effect of ASIC mutations or manipulations predictable and to help drive efforts to develop more selective and useful pharmacological agents.

 描述（由申请人提供）：在大脑中，许多病理生理事件都伴随着细胞外环境的酸化。毫不奇怪，神经元往往表现出强大的电生理反应，在这种变化在细胞外pH值。酸敏感离子通道（ASIC）介导的绝大多数这些电流和过去几年已经看到了我们的理解ASIC神经生物学的大幅增加。由于这项研究，ASIC与中风后的细胞死亡、疼痛、恐惧相关的记忆和药物成瘾等疾病有关。然而，我们还没有看到我们对ASIC如何在分子水平上运作的理解出现相应的激增。如果没有这些知识，我们就无法将我们对神经生物学日益增长的认识转化为有用的治疗方法。候选人将联合收割机结合他在电生理学和荧光学方面的专业知识和冷冻电子显微镜（cryo-EM）的新培训，以弥合ASIC神经生物学和生物物理学之间的差距。 这将通过三个目标来实现。在K阶段的特定目标1期间，候选人将获得ASIC 1a apo和脱敏状态的高分辨率cryo-EM结构。Jayaraman博士将提供蛋白质纯化方面的新培训，冈萨雷斯博士将提供ASIC方面的具体建议。Serysheva博士将提供冷冻EM成像和3D重建方面的专家指导，使候选人能够独立进行实验。这些结构将提供载脂蛋白状态的第一个一瞥，并确定稳态脱敏（由pH值接近7引起）是否与活化后的脱敏（pH值接近5）相同。R阶段将从目标2开始开始，候选人和他的学员将使用串联的亚基来确定活化的化学计量，并确定亚基之间的构象变化是否一致。在目标3中，候选人及其受训人员将获得异聚ASIC（大脑中的主要群体）的高分辨率cryo-EM图像。这种功能信息和结构数据的结合将有助于实现候选人的两个近期目标，即对ASIC的基本操作提供必要的见解，并成为ASIC门控领域的领导者。此外，这些研究将提供初步数据，以开发有竞争力的R 01应用程序，重点是ASIC异聚体的结构和功能。这个K99/R 00奖项也将更好地定位候选人，以满足使ASIC突变或操作的影响可预测的长期目标，并帮助推动开发更具选择性和有用的药理学药物的努力。