Identifying and Characterizing Novel Genes for Inherited Bone Marrow Failure

我的博士研究是遗传性骨髓衰竭基因的鉴定和表征 骨髓增生异常综合征(BMF/MDS)。自从我上次提交F30以来，我已经确定了两个 通过对受严重影响的家系进行基因组分析，发现这些疾病的候选基因。这样做的目的是 新的建议是测试每个基因在其宿主家族中作为遗传性BMF/MDS的可能原因，然后 评估每个基因在造血中的可能作用。 在目标1中，我将测试Gale(UDP-半乳糖-4-表异构酶)的错义突变是否可能是 导致严重的血小板减少症、发热性中性粒细胞减少症和大量血缘关系中的贫血 志同道合。在目标1a中，我将通过对来自Gale的DNA中的基因进行完全测序来筛选Gale的其他突变 来自BMF/MDS储存库的无关患者。在目标1b中，我将比较 野生型和突变型大风的高效液相色谱分析。我还将比较野生型和突变型的晶体结构 大风与NADH和核苷酸糖形成复合体。在目标1c中，我将压制原始人的大风 CD34造血干细胞，并测量细胞的增殖、分化和存活。我也会 探索内质网应激和其他可能是大风损害机制的影响 造血发育。 在目标2中，我将测试转录因子TFDP2(E2F二聚体)中的错义突变 Partner-2)可能导致严重的血小板减少症、贫血和颅缝早闭 血缘关系密切的家庭中的兄弟姐妹。在目标2a中，我将筛查DNA中TFDP2的其他突变 来自BMF/MDS储存库的患者，以及独立的颅脑融合症患者。在目标2b中， 我将比较突变体和野生型TFDP2与E2F伙伴的结合亲和力，并将 比较野生型和突变型E2F/TFDP2复合体对靶基因转录活性的影响。 在Aim 2c中，我将检测TFDP2对CD34细胞的抑制作用，并检测细胞周期的缺陷 通过比较内复制水平和BrdU掺入情况，研究过渡和DNA复制。 阐明GALE和TFDP2在造血中的作用将为该领域增加重要的知识。 研究Gale的作用有助于解释糖基化的变化如何影响造血 增殖分化。E2F通路在细胞周期调控中广为人知，但在 发展。研究TFDP2的突变将提高我们对E2F/TFDP作用的理解 转录因子复合体与造血和人类发育。

My PhD research is the identification and characterization of genes for inherited bone marrow failure and myelodysplastic syndromes (BMF/MDS). Since my previous F30 submission, I have identified two candidate genes for these conditions by genomic analysis of severely affected families. The aims of this new proposal are to test each gene as the possible cause of inherited BMF/MDS in its host family, then to evaluate the possible role of each gene in hematopoiesis. In Aim 1, I will test whether a missense mutation in GALE (UDP-galactose-4-epimerase) may be responsible for severe thrombocytopenia, febrile neutropenia, and anemia in a large consanguineous kindred. In Aim 1a, I will screen for other mutations in GALE by fully sequencing the gene in DNA from unrelated patients from the BMF/MDS repositories. In Aim 1b, I will compare enzymatic activities of wildtype and mutant GALE by HPLC. I will also compare the crystal structures of wildtype and mutant GALE in complex with NADH and nucleotide sugars. In Aim 1c, I will suppress GALE in primary human CD34+ hematopoietic stem cells and measure cell proliferation, differentiation, and survival. I will also explore ER stress and other effects that may be mechanisms by which loss of GALE impairs hematopoietic development. In Aim 2, I will test whether a missense mutation in transcription factor TFDP2 (E2F Dimerization Partner-2) may be responsible for severe thrombocytopenia, anemia, and craniosynostosis in affected siblings in a consanguineous family. In Aim 2a, I will screen for other mutations in TFDP2 in DNA from patients from the BMF/MDS repositories and, independently, in patients with craniosynostosis. In Aim 2b, I will compare mutant and wildtype TFDP2 with respect to binding affinity to E2F partners and will compare effects of wildtype and mutant E2F/TFDP2 complexes on transcription activity of target genes. In Aim 2c, I will test the effects of suppression of TFDP2 on CD34+ cells, and test for defects in cell cycle transition and in DNA replication by comparing endoreduplication levels and BrdU incorporation. Elucidating roles for GALE and TFDP2 in hematopoiesis will add important knowledge to the field. Studying the role of GALE can help explain how changes in glycosylation affect hematopoietic proliferation and differentiation. E2F pathways are well-known in cell cycle regulation, but less so in development. Studying mutation in TFDP2 will improve our understanding of the role of E2F/TFDP transcription factor complexes in hematopoiesis and human development.