Structural and Biological Characterization of Diverse Oligomers Derived from Abeta
Structural and Biological Characterization of Diverse Oligomers Derived from Abeta
批准号:
10214205
负责人:
JAMES S NOWICK
金额:
$137.31万
依托单位国家:
美国
项目类别:
财政年份:
2021
资助国家:
美国
项目状态:
已结题
起止时间:
2021-05-01 至 2024-04-30
关键词:
AddressAffectAlzheimer&aposs DiseaseAmyloid beta-ProteinAntibodiesApoptosisAstrocytesBiochemicalBiologicalBiologyBiophysicsBrainC-terminalCalciumCell SeparationDiagnosticEngineeringEventFluorescenceFluorescence MicroscopyFluorescence Resonance Energy TransferHeterogeneityHomeostasisImmunologicsKnowledgeLaboratoriesLengthLightLinkMicrogliaModelingMolecularMolecular Sieve ChromatographyMolecular TargetMusN-terminalNMR SpectroscopyNecrosisNerve DegenerationNeuritesNeuronsOxidative StressPeptide FragmentsPeptidesPositioning AttributePropertyProteinsResearchRoentgen RaysSiteSliceSpectrum AnalysisStructural ModelsStructureTailVertebral columnX-Ray Crystallographyabeta accumulationabeta oligomeramyloid peptideanalytical ultracentrifugationbasebrain cellcell typecrosslinkdesigndimerdisulfide bondendoplasmic reticulum stressexperimental studyimmunoreactivityinsightmethyl grouppolyclonal antibodyprotein aminoacid sequenceresponsestructural biologysynthetic peptidetau aggregationtau phosphorylationuptake
中文摘要
项目摘要/摘要:了解β-淀粉样肽(Aβ)聚集形成毒性
英文摘要
Project Summary/Abstract: Understanding the aggregation of the β-amyloid peptide (Aβ) to form toxic
oligomers is fundamental to understanding the molecular basis of Alzheimer’s disease (AD). Despite decades of
research, the structures of Aβ oligomers remain a mystery, constituting a significant gap in understanding AD.
This proposal seeks to address this knowledge gap through the structural, biophysical, and biological profiling of
a diverse group of Aβ oligomer models and correlation of these models with biogenic Aβ oligomers.
My laboratory has developed an approach for create structurally defined Aβ oligomer models composed of
peptide fragments from Aβ constrained into a β-hairpin. The X-ray crystallographic structures of these Aβ β-
hairpin peptides reveal the structures of oligomers that the peptides can form and key intermolecular contacts
that the peptides make in the oligomeric state. These contacts reveal sites that can be crosslinked to create
covalently stabilized Aβ oligomer models that mimic the crystallographic oligomers. Studying the crosslinked
oligomers then allows detailed correlation between oligomer structure and biophysical and biological properties.
We will characterize how our Aβ oligomer models interact with and affect neurons, microglia, and astrocytes,
to provide detailed insights into how our Aβ oligomer models impact different brain cell types and thus help shed
light on the relationship between Aβ oligomer structure and cellular events that occur in AD. We will use
fluorescence microscopy and fluorescence-assisted cell sorting (FACS) to visualize and quantify the interactions
and uptake of our Aβ oligomer models with neurons, microglia, and astrocytes. We will evaluate downstream
biochemical and cellular effects elicited by Aβ oligomer models in neurons, microglia, and astrocytes and
evaluate how treatment affects apoptosis, necrosis, calcium homeostasis, endoplasmic reticulum stress,
oxidative stress, neurite length, tau phosphorylation and aggregation, and proinflammatory responses in
microglia and astrocytes. To elucidate the relationship between the structures of our Aβ oligomer models and
biogenic Aβ oligomers, we will generate polyclonal antibodies against each Aβ oligomer model and then examine
the immunoreactivity of these antibodies with brain protein extract and brain slices from 5XFAD mice.
We will discover new Aβ oligomer models, by creating new Aβ β-hairpin peptides that contain more of the
Aβ peptide sequence and alternate β-strand alignments. We will create new crosslinked Aβ oligomer models by
identifying key contacts in existing and newly discovered Aβ oligomer models and then engineering in disulfide
bonds to stabilize the oligomers. To characterize the structures and oligomerization properties of the new Aβ
oligomer models that we generate, we will use X-ray crystallography and a variety of other biophysical
experiments, including CD spectroscopy, SDS-PAGE, size exclusion chromatography (SEC), analytical
ultracentrifugation (AUC), NMR spectroscopy, and Förster resonance energy transfer (FRET) studies. The
biological and immunological properties of these new Aβ oligomer models will be studied as described above.
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Correction to "β-Hairpin Alignment Alters Oligomer Formation in Aβ-Derived Peptides".
更正“β 发夹排列改变 Aβ 衍生肽中的寡聚体形成”。
DOI:
10.1021/acs.biochem.4c00037
发表时间:
2024
期刊:
Biochemistry
影响因子:
2.9
作者:
[Ruttenberg,SarahM, Kreutzer,AdamG, Truex,NicholasL, Nowick,JamesS]
通讯作者:
Nowick,JamesS
DOI:
10.1021/acs.biochem.3c00526
发表时间:
2024-01-16
期刊:
BIOCHEMISTRY
影响因子:
2.9
作者:
[Ruttenberg, Sarah M., Kreutzer, Adam G., Truex, Nicholas L., Nowick, James S.]
通讯作者:
Nowick, James S.
DOI:
10.1021/acschemneuro.1c00833
发表时间:
2022-03-16
期刊:
ACS chemical neuroscience
影响因子:
5
作者:
[Howitz WJ, Guaglianone G, McKnelly KJ, Haduong K, Ashby SN, Laayouni M, Nowick JS]
通讯作者:
Nowick JS
DOI:
10.1039/d3sc05185d
发表时间:
2023-12-20
期刊:
CHEMICAL SCIENCE
影响因子:
8.4
作者:
[Samdin, Tuan D., Jones, Chelsea R., Guaglianone, Gretchen, Kreutzer, Adam G., Freites, J. Alfredo, Wierzbicki, Michal, Nowick, James S.]
通讯作者:
Nowick, James S.
DOI:
10.1039/d2sc02080g
发表时间:
2022-07-06
期刊:
Chemical science
影响因子:
8.4
作者:
[]
通讯作者:
Synthesis and Evaluation of aza-Novo29 as an Antibiotic Candidate
-
批准号:10527638
-
项目类别:
-
资助金额:$21.71万
-
财政年份:2022
-
负责人:JAMES S NOWICK
-
依托单位:
Synthesis and Evaluation of aza-Novo29 as an Antibiotic Candidate
-
批准号:10624354
-
项目类别:
-
资助金额:$18.34万
-
财政年份:2022
-
负责人:JAMES S NOWICK
-
依托单位:
Amyloidogenic Antibiotics
-
批准号:10306399
-
项目类别:
-
资助金额:$18.49万
-
财政年份:2020
-
负责人:JAMES S NOWICK
-
依托单位:
Synthesis and Studies of a New Family of Antibiotics
-
批准号:9231356
-
项目类别:
-
资助金额:$17.35万
-
财政年份:2016
-
负责人:JAMES S NOWICK
-
依托单位:
Synthesis and Studies of a New Family of Antibiotics
-
批准号:9014830
-
项目类别:
-
资助金额:$19.85万
-
财政年份:2016
-
负责人:JAMES S NOWICK
-
依托单位:
Mimicry of Amyloid Oligomers
-
批准号:8607967
-
项目类别:
-
资助金额:$28.89万
-
财政年份:2012
-
负责人:JAMES S NOWICK
-
依托单位:
Mimicry of Amyloid Oligomers
-
批准号:9205515
-
项目类别:
-
资助金额:$29.14万
-
财政年份:2012
-
负责人:JAMES S NOWICK
-
依托单位:
Mimicry of Amyloid Oligomers
-
批准号:8413852
-
项目类别:
-
资助金额:$28.13万
-
财政年份:2012
-
负责人:JAMES S NOWICK
-
依托单位:
Mimicry of Amyloid Oligomers
-
批准号:8239411
-
项目类别:
-
资助金额:$27.7万
-
财政年份:2012
-
负责人:JAMES S NOWICK
-
依托单位:
Chemical Models of Protein beta-Sheet Interactions
-
批准号:7847773
-
项目类别:
-
资助金额:$9.82万
-
财政年份:2009
-
负责人:JAMES S NOWICK
-
依托单位:
NEW STRATAGIES FOR FORMATION OF PEPTIDE BETA-SHEETS
-
批准号:2186610
-
项目类别:
-
资助金额:$9.37万
-
财政年份:1994
-
负责人:JAMES S NOWICK
-
依托单位:
CHEMICAL MODELS OF PROTEIN BETA SHEET INTERACTIONS
-
批准号:6385799
-
项目类别:
-
资助金额:$19.18万
-
财政年份:1994
-
负责人:JAMES S NOWICK
-
依托单位:
CHEMICAL MODELS OF PROTEIN BETA SHEET INTERACTIONS
-
批准号:2851757
-
项目类别:
-
资助金额:$23.0万
-
财政年份:1994
-
负责人:JAMES S NOWICK
-
依托单位:
CHEMICAL MODELS OF PROTEIN BETA SHEET INTERACTIONS
-
批准号:6310712
-
项目类别:
-
资助金额:$1.87万
-
财政年份:1994
-
负责人:JAMES S NOWICK
-
依托单位:
Chemical Models of Protein beta-Sheet Interactions
-
批准号:6873241
-
项目类别:
-
资助金额:$28.59万
-
财政年份:1994
-
负责人:JAMES S NOWICK
-
依托单位:
Chemical Models of Protein beta-Sheet Interactions
-
批准号:6987174
-
项目类别:
-
资助金额:$26.29万
-
财政年份:1994
-
负责人:JAMES S NOWICK
-
依托单位:
Chemical Models of Protein beta-Sheet Interactions
-
批准号:7163421
-
项目类别:
-
资助金额:$25.4万
-
财政年份:1994
-
负责人:JAMES S NOWICK
-
依托单位:
NEW STRATEGIES FOR FORMATION OF PEPTIDE BETA-SHEETS
-
批准号:2186611
-
项目类别:
-
资助金额:$10.03万
-
财政年份:1994
-
负责人:JAMES S NOWICK
-
依托单位:
NEW STRATAGIES FOR FORMATION OF PEPTIDE BETA-SHEETS
-
批准号:2186609
-
项目类别:
-
资助金额:$9.17万
-
财政年份:1994
-
负责人:JAMES S NOWICK
-
依托单位:
CHEMICAL MODELS OF PROTEIN BETA SHEET INTERACTIONS
-
批准号:6519526
-
项目类别:
-
资助金额:$19.67万
-
财政年份:1994
-
负责人:JAMES S NOWICK
-
依托单位:
海外基金