Supplement Year 2: USC FaceBase III Craniofacial Development and Dysmorpholoy Data Management and Integration Hub
Supplement Year 2: USC FaceBase III Craniofacial Development and Dysmorpholoy Data Management and Integration Hub
批准号:
10844313
负责人:
Yang Chai
金额:
$9.84万
依托单位国家:
美国
项目类别:
财政年份:
2019
资助国家:
美国
项目状态:
已结题
起止时间:
2019-08-01 至 2024-07-31
关键词:
AddressAnatomyAnimal ModelBiomedical ResearchCommunitiesDataData SetDevelopmentDysmorphologyEducational MaterialsFAIR principlesFaceFaceBaseFosteringFutureGoalsHealthHumanKnowledgeLeadMolecularNational Institute of Dental and Craniofacial ResearchResearchResearch DesignResearch PersonnelRetrievalStudy modelsTranslatingcommunity engagementcommunity settingcraniofacialcraniofacial developmentdata hubdata integrationdata managementdata repositorydata resourcedesignempowermentimprovedinnovationlarge datasetsnext generationoperationoutreachtraining opportunity
中文摘要
项目摘要
FaceBase联盟的主要目标是通过创建
颅面发育和畸形的综合数据集,
将这些数据集传播到更广泛的颅面研究社区。的
FaceBase 3数据管理和集成中心建立在现有的
成功的科学和技术团队,领导了开发,部署,
FaceBase 2数据中心的运营和社区参与。看
展望FaceBase联盟未来的影响,我们面临着重大挑战
包括:(1)如何标注大型数据集以支持生物医学研究
(2)如何改善数据整合和促进数据搜索,
从中心检索;(3)如何使用FaceBase的数据来设计研究,
否则通知我们未来的研究;(4)如何将我们的知识从
改善人类颅面健康的动物模型研究。重要的是,项目
我们在这里提出的设计是为了解决这些问题,因为我们发展解剖学-
基于全面的数据搜索和显示,
社区,并促进FaceBase数据的使用。为了实现这些目标,
我们提出以下三个具体目标:具体目标1:创建FAIR数据
颅面研究社区的知识库和资源中心。具体目标
2:促进和实现由NIDCR支持的FaceBase数据贡献
研究人员具体目标3:通过以下方式培养活跃的FaceBase用户社区
外联活动和传播新的特点和现有数据集。我们
将创建教育材料,并提供培训机会,为下一个
颅面研究者的一代。最终,我们提出的项目将不会
有助于我们全面了解
颅面发育的机制,但也将展示如何其他人可以
使用FaceBase Hub的数据集开发创新方法,
改善人类健康。
英文摘要
PROJECT SUMMARY
The major goal of the FaceBase Consortium is to advance research by creating
comprehensive datasets of craniofacial development and dysmorphologies, and to
disseminate these datasets to the wider craniofacial research community. The
FaceBase 3 Data Management and Integration Hub builds on the existing and
successful scientific and technical team that has lead the development, deployment,
operation and community engagement of the FaceBase 2 data hub. Looking
forward to the future impact of the FaceBase Consortium, we face major challenges
that include: (1) how to annotate large datasets to empower the biomedical research
community; (2) how to improve data integration and facilitate data search and
retrieval from the hub; (3) how to use the data from FaceBase to design studies and
otherwise inform our future research; and (4) how to translate our knowledge from
animal model studies to improve human craniofacial health. Importantly, the projects
we propose here are designed to address these issues as we develop anatomy-
based comprehensive data search and display, incorporate additional datasets from
the community, and promote the usage of FaceBase data. In pursuit of these goals,
we propose the following three Specific Aims: Specific Aim 1: Create a FAIR data
repository and resource hub for the craniofacial research community. Specific Aim
2: Promote and enable data contributions to FaceBase by NIDCR-supported
researchers. Specific Aim 3: Foster a community of active FaceBase users through
outreach activities and dissemination of new features and available datasets. We
will create educational materials and provide training opportunities for the next
generation of craniofacial researchers. Ultimately, our proposed projects will not
only contribute to our comprehensive understanding of the molecular regulatory
mechanisms of craniofacial development but will also demonstrate how others can
use the datasets from the FaceBase Hub to develop innovative approaches to
improve human health.
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CUF-Links: Continuous and Ubiquitous FAIRness Linkages for reproducible research.
CUF-LINKS:可再现研究的连续和无处不在的公平链接。
DOI:
10.1109/mc.2022.3160876
发表时间:
2022-08
期刊:
Computer
影响因子:
2.2
作者:
[]
通讯作者:
DOI:
10.1162/99608f92.44d21b86
发表时间:
2022
期刊:
Harvard data science review
影响因子:
--
作者:
[]
通讯作者:
Toward FAIR Knowledge Turns in Bioinformatics.
生物信息学中的公平知识转向。
DOI:
10.1109/bibm47256.2019.8982988
发表时间:
2019
期刊:
Proceedings. IEEE International Conference on Bioinformatics and Biomedicine
影响因子:
--
作者:
[Schuler,Robert, Bugacov,Alejandro, Blow,Matthew, Kesselman,Carl]
通讯作者:
Kesselman,Carl
Towards Co-Evolution of Data-Centric Ecosystems.
迈向以数据为中心的生态系统的共同进化。
DOI:
10.1145/3400903.3400908
发表时间:
2020
期刊:
Scientific and statistical database management : International Conference, SSDBM ... : proceedings. International Conference on Scientific and Statistical Database Management
影响因子:
--
作者:
[Schuler,Robert, Czajkowski,Karl, D'Arcy,Mike, Tangmunarunkit,Hongsuda, Kesselman,Carl]
通讯作者:
Kesselman,Carl
Center for TMD IMPACT
-
批准号:10827805
-
项目类别:
-
资助金额:$33.14万
-
财政年份:2023
-
负责人:Yang Chai
-
依托单位:
Hybrid- and Multi-Cloud Storage Strategies for Cost-effective Deployment of Data Resources
-
批准号:10827612
-
项目类别:
-
资助金额:$18.33万
-
财政年份:2023
-
负责人:Yang Chai
-
依托单位:
USC FaceBase III Craniofacial Development and Dysmorpholoy Data Management and Integration Hub
-
批准号:10562451
-
项目类别:
-
资助金额:$4.68万
-
财政年份:2022
-
负责人:Yang Chai
-
依托单位:
Mechanisms and rescue of craniosynostosis associated with gene-environment interaction
-
批准号:10275469
-
项目类别:
-
资助金额:$62.7万
-
财政年份:2021
-
负责人:Yang Chai
-
依托单位:
Mechanisms and rescue of craniosynostosis associated with gene-environment interaction
-
批准号:10434153
-
项目类别:
-
资助金额:$60.74万
-
财政年份:2021
-
负责人:Yang Chai
-
依托单位:
Mechanisms and rescue of craniosynostosis associated with gene-environment interaction
-
批准号:10614051
-
项目类别:
-
资助金额:$60.48万
-
财政年份:2021
-
负责人:Yang Chai
-
依托单位:
Center for Dental, Oral, and Craniofacial Tissue and Organ Regeneration (C-DOCTOR)
-
批准号:10617717
-
项目类别:
-
资助金额:$652.35万
-
财政年份:2020
-
负责人:Yang Chai
-
依托单位:
Center for Dental, Oral, and Craniofacial Tissue and Organ Regeneration (C-DOCTOR)
-
批准号:10394726
-
项目类别:
-
资助金额:$645.83万
-
财政年份:2020
-
负责人:Yang Chai
-
依托单位:
Center for Dental, Oral, and Craniofacial Tissue and Organ Regeneration (C-DOCTOR)
-
批准号:10160870
-
项目类别:
-
资助金额:$626.03万
-
财政年份:2020
-
负责人:Yang Chai
-
依托单位:
USC FaceBase III Craniofacial Development and Dysmorpholoy Data Management and Integration Hub
-
批准号:10227702
-
项目类别:
-
资助金额:$254.85万
-
财政年份:2019
-
负责人:Yang Chai
-
依托单位:
USC FaceBase III Craniofacial Development and Dysmorpholoy Data Management and Integration Hub
-
批准号:10674539
-
项目类别:
-
资助金额:$254.06万
-
财政年份:2019
-
负责人:Yang Chai
-
依托单位:
USC FaceBase III Craniofacial Development and Dysmorpholoy Data Management and Integration Hub
-
批准号:9980867
-
项目类别:
-
资助金额:$255.45万
-
财政年份:2019
-
负责人:Yang Chai
-
依托单位:
USC FaceBase III Craniofacial Development and Dysmorpholoy Data Management and Integration Hub
-
批准号:10473512
-
项目类别:
-
资助金额:$251.91万
-
财政年份:2019
-
负责人:Yang Chai
-
依托单位:
Creating Scalable, Reliable, Sustainable Infrastructure for FAIR Data
-
批准号:10166440
-
项目类别:
-
资助金额:$17.5万
-
财政年份:2019
-
负责人:Yang Chai
-
依托单位:
Enhancing FAIRness of the FaceBase Research Data Hub
-
批准号:10408536
-
项目类别:
-
资助金额:$25.21万
-
财政年份:2019
-
负责人:Yang Chai
-
依托单位:
USC FaceBase III Craniofacial Development and Dysmorpholoy Data Management and Integration Hub
-
批准号:10674124
-
项目类别:
-
资助金额:$4.68万
-
财政年份:2019
-
负责人:Yang Chai
-
依托单位:
Improving AI/ML-readiness of FaceBase Research Datasets
-
批准号:10412668
-
项目类别:
-
资助金额:$33.76万
-
财政年份:2019
-
负责人:Yang Chai
-
依托单位:
Molecular and Cellular Basis of Craniosynostosis
-
批准号:9407492
-
项目类别:
-
资助金额:$8.82万
-
财政年份:2017
-
负责人:Yang Chai
-
依托单位:
Center for Dental, Oral, and Craniofacial Tissue and Organ Regeneration (C-DOCTOR)
-
批准号:9438909
-
项目类别:
-
资助金额:$397.81万
-
财政年份:2017
-
负责人:Yang Chai
-
依托单位:
Molecular and Cellular Basis of Craniosynostosis
-
批准号:9891852
-
项目类别:
-
资助金额:$66.94万
-
财政年份:2016
-
负责人:Yang Chai
-
依托单位:
海外基金