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Functional characterization of obesity-associated OXTR enhancers

Functional characterization of obesity-associated OXTR enhancers
肥胖相关 OXTR 增强子的功能表征
批准号:
10852690
负责人:
Nadav Ahituv
金额:
$8.36万
依托单位国家:
美国
项目类别:
财政年份:
2020
资助国家:
美国
项目状态:
未结题
起止时间:
2020-07-01 至 2025-06-30
关键词:
ATAC-seqAffectAutomobile DrivingBehaviorBehavioralBehavioral AssayBiological AssayBirthBody WeightBrainCRISPR-mediated transcriptional activationCause of DeathCell LineChromatinClustered Regularly Interspaced Short Palindromic RepeatsCollaborationsConserved SequenceDNase I hypersensitive sites sequencingDataData LinkagesData SetDevelopmentDiseaseEP300 geneEatingEnergy MetabolismEnhancersEnvironmentFamily StudyFatty acid glycerol estersFood EnergyFood Intake RegulationGeneticGenetic Enhancer ElementGenetic Predisposition to DiseaseGenetic VariationGenomeGenomicsGoalsHarvestHeart DiseasesHeritabilityHomeostasisHumanHuman GenomeHyperphagiaHypertensionHypothalamic structureImmunofluorescence ImmunologicIn VitroIntronsKnockout MiceKnowledgeLaboratoriesLactationLeadLinkLuciferasesMalignant NeoplasmsMapsMaternal BehaviorMessenger RNAMetabolismMethylationModelingMusMutationMyocardial InfarctionNeuronsNon-Insulin-Dependent Diabetes MellitusNucleic Acid Regulatory SequencesObesityOxytocinOxytocin ReceptorPair BondPhenotypePlayPrader-Willi SyndromeProteinsPublic HealthQuantitative Reverse Transcriptase PCRRegulationRegulator GenesRegulatory ElementReporterRiskRoleSeriesShapesSignal TransductionSingle Nucleotide PolymorphismSocial BehaviorStrokeTestingTherapeuticTransgenic MiceTwin StudiesUntranslated RNAVariantVisualizationWeight GainWestern BlottingWorkbehavioral phenotypingbinge type behaviorcancer typecandidate identificationcandidate selectionchromatin immunoprecipitationexperimental studygenetic variantgenome wide association studygenomic datain vivoindexinginsightobesity treatmentparent grantreceptor expressionsingle-cell RNA sequencingspatiotemporaltherapeutic evaluation

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Contact PD/PI: Vaisse, Christian Project Summary/Abstract Obesity leads to an increased risk for type 2 diabetes, heart attack, many types of cancer, hypertension, stroke, and is estimated to soon be the leading cause of death in the US. Through twin and family studies, obesity has been found to have a 40-70% heritability rate, pointing to a strong genetic etiology. The long-term objective of our studies is to determine how genetic variation predisposes humans to obesity and what the therapeutic implications are for this condition. To find common genetic variants associated with obesity, numerous genome-wide association studies (GWAS) have been performed. Over 500 loci have been found to associate with increased body weight index (BMI), all of which reside in noncoding regions of the genome . However, little progress has been made in outlining the causal SNPs and understanding the mechanisms by which they actually cause obesity. In this proposal, we explore the hypothesis that obesity-associated SNPs affect regulatory regions that are active in neuronal sub-population implicated in the regulation of food intake and body weight. Using state-of-the-art approaches that we have recently pioneered through collaborations between the Ahituv and Vaisse laboratories we propose to: - Extend and refine the regulatory landscape of hypothalamic neuronal subpopulations implicated in body weight regulation to identify candidate regulatory elements overlapping obesity GWAS single nucleotide polymorphisms (SNPs). - Use CRISPR inactivation (CRISPRi) in mice to directly test the functional role of regulatory elements that encompass obesity-associated SNPs. - Use CRISPR activation (CRISPRa) in mice to test the therapeutic potential of activity modulation of identified target regulatory regions. Combined, our work will not only provide a regulatory map of neuronal subtypes associated obesity, but also functionally characterize these regions and show their therapeutic potential. Page 6 Project Summary/Abstract
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