Model Studies of Acetyl Coenzyme A Synthase

乙酰辅酶A合酶的模型研究

• 批准号: 7166829
• 负责人: CHARLES G. RIORDAN
• 金额: $ 21.55万
• 依托单位: UNIVERSITY OF DELAWARE
• 依托单位国家: 美国
• 财政年份: 2000
• 资助国家: 美国
• 起止时间: 2000-04-01 至 2009-12-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/7166829
• 关键词: Acetates; Acetyl Coenzyme A; Active Sites; Address; Anabolism; Architecture; Area; Bacteria; Binding; Binding Sites; Biochemical Reaction; Biological; Biological Models; Catalysis; Catalytic Domain; Chemical Structure; Chemicals; Colon; Communities; Complex; Crystallography; DNA; Depth; Electronics; Ensure; Enzymes; Functional disorder; Gastric lymphoma; Genus Cola; Goals; Helicobacter pylori; Human; Individual; Inorganic Chemistry; Investigation; Kinetics; Knowledge; Laboratories; Libraries; Measurement; Metals; Methodology; Modeling; Molecular; Molecular Weight; Mononuclear; Nickel; Numbers; Organism; Oxidation-Reduction; Peptic Ulcer; Peptides; Preparation; Production; Property; Proteins; Protocols documentation; Reaction; Research; Research Personnel; Scheme; Site; Stomach Carcinoma; Structure; Structure-Activity Relationship; Study models; System; Testing; Time; Toxic effect; Trace Elements; analog; base; carcinogenesis; chemical property; design; functional group; interest; novel; oxidation; programs; research study; structural biology

DESCRIPTION (provided by applicant): The proposed research is designed to address specific questions of molecular and electronic structure, and chemical reactivity to gain a fundamental understanding of the catalytic activity of the Ni-containing protein acetyl coenzyme A synthase (ACS) through the synthesis, characterization and elucidation of reactivity of model complexes. This methodology will permit characterization of the intrinsic properties of structure and function of the metal sites at the molecular level of detail decoupled from the protein architecture. Recent results from structural biology have established details of the active site structure making now the optimum time to address this problem as the targets are well defined. Individual reactions will be systematically interrogated using the protocols of mechanistic inorganic chemistry including product analyses, kinetic measurements, stereochemical and radical clock probe investigations. The long-term goal of this project is to develop a detailed mechanistic understanding of how the structural, electronic and chemical properties of nickel sites in proteins are optimized for their intended catalytic transformations. The proposed research impacts our understanding of the biological implications of the essential trace element nickel that include the virility of Helicobacter pylori which has been associated with peptic ulcer disease, gastric carcinoma, and gastric lymphoma, and carcinogenesis through production of oxidizing species that degrade DNA. Additionally, acetogenic and methanogenic bacteria, organisms that contain ACS, may be important to human digestive function and dysfunction as they occupy a large volume of the colon. More broadly, a deeper understanding of ACS catalysis will advance fundamental understanding of redox-based Ni toxicity.

描述（由申请人提供）：拟议的研究旨在解决分子和电子结构以及化学反应性的具体问题，以通过合成、表征和阐明模型复合物的反应性，从根本上了解含镍蛋白乙酰辅酶A合酶（ACS）的催化活性。这种方法将允许在分子水平上的细节从蛋白质结构解耦的金属网站的结构和功能的内在特性的表征。结构生物学的最新结果已经建立了活性位点结构的细节，现在是解决这个问题的最佳时机，因为目标已经明确。个别反应将使用机械无机化学的协议，包括产品分析，动力学测量，立体化学和自由基时钟探针调查系统地询问。该项目的长期目标是详细了解蛋白质中镍位点的结构，电子和化学性质如何优化其预期的催化转化。拟议的研究影响了我们对必需微量元素镍的生物学意义的理解，包括与消化性溃疡疾病，胃癌和胃淋巴瘤相关的幽门螺杆菌的男性能力，以及通过产生降解DNA的氧化物质的致癌作用。此外，产乙酸和产甲烷细菌，含有ACS的生物体，可能对人类消化功能和功能障碍很重要，因为它们占据了结肠的大体积。更广泛地说，对ACS催化作用的深入了解将促进对基于氧化还原的镍毒性的基本理解。