Collective dynamics in cell clusters
Collective dynamics in cell clusters
批准号:
10733920
负责人:
Stanislav Y. Shvartsman
金额:
$33.37万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2019
资助国家:
美国
项目状态:
未结题
起止时间:
2019-09-01 至 2027-06-30
关键词:
3-DimensionalActive Biological TransportAddressAnimalsBiologyCell CountCell Cycle ArrestCell LineageCellsClinicalComputer ModelsCouplingCytoplasmCytoplasmic streamingCytoskeletonDataDepositionDevelopmentDiffusionDrosophila genusEmbryoEmbryonic DevelopmentEnd Point AssayExperimental ModelsFertilityFertility DisordersFilamentFundingFutureGametogenesisGeneticGenetic ModelsGenetic TranscriptionGermGerm CellsGrowthHumanImageInterdisciplinary StudyJointsKinesinMediatingMicrotubulesMitoticModelingMotorNatureOocytesOogenesisProcessProteinsRegulationRelaxationReproductionReproductive BiologyResearchResearch PersonnelResearch SupportResourcesSignal TransductionSomatic CellSpeedStructure of primordial sex cellStudy modelsSupporting CellSystemTestingTheoretical StudiesTrainingWalkingWorkbiophysical modelcomputer studiescomputerized toolsdata toolsdesigneggexperimental studyfluid flowhydrodynamic flowimage processingimaging studyinsightmodel organismscientific computingstatisticstheoriestumor
中文摘要
摘要
这项工作将联合收割机的实验和理论相结合,以促进定量的了解动物
配子发生我们使用果蝇作为一种遗传模式生物,非常适合于定量研究。
跨学科的研究,并侧重于生殖生物学的两个进化保守的方面。首先,鸡蛋
并且大体积的早期胚胎需要用于协调细胞质过程的有效手段。研究
多个实验系统表明,大细胞中的这种协调依赖于大规模的流体动力学
流速可达100 s nm/s,可介导细胞质的快速混合和运输。
件.我们的目标1研究了果蝇卵子发生中的一个关键点上的这种流动,
流由在皮层锚定的微管阵列上行走的装载货物的驱动蛋白马达驱动。我们
将使用计算建模和实时成像系统地测试最近的理论,根据该理论,
细胞质流动自发出现,通过流体动力学耦合的皮质锚定,
微管其次,果蝇和人类的配子发生都是从细胞周期的形成开始的
原始生殖细胞(Primordial germ cells,PCS)PGC数量的定量控制对生物体的生育力至关重要
以及避免生殖系肿瘤。目的2研究果蝇PGCs数量的定量调控
胚胎,其中PGC由极细胞的有限分裂形成,极细胞是胚胎中形成的第一个真正的细胞。
我们将使用实时成像来表征极细胞谱系的统计学特征,并检验控制极细胞谱系的假设。
PGC数可以用一个模型来解释,在这个模型中,有丝分裂时钟慢慢地偏离振荡状态。
考虑到细胞质流动的普遍性和PGC调控的保守机制,我们的结果将
通过提供发育和生殖生物学基本问题的答案而产生广泛的影响。
英文摘要
Abstract
The proposed work will combine experiments and theory to advance quantitative understanding of animal
gametogenesis. We use Drosophila as a genetic model organism that is highly suitable for quantitative
interdisciplinary research and focus on two evolutionarily conserved aspects of reproductive biology. First, eggs
and early embryos of large volumes require efficient means for coordinating cytoplasmic processes. Studies in
multiple experimental systems indicate that such coordination in large cells relies on large-scale hydrodynamic
flows, which reach the speeds of 100s nm/s and can mediate rapid mixing and transport of cytoplasmic
components. Our Aim 1 investigates such flows at a critical point in Drosophila oogenesis, where cytoplasmic
streaming is driven by cargo-loaded kinesin motors walking on arrays of cortically anchored microtubules. We
will use computational modeling and live imaging to systematically test a recent theory according to which
cytoplasmic streaming emerges spontaneously, through hydrodynamic coupling of cortically anchored
microtubules. Second, gametogenesis in both Drosophila and humans starts with the formation of cell-cycle
arrested primordial germ cells (PCSs). Quantitative control of PGC numbers is essential for organismal fertility
and for avoiding germline tumors. Aim 2 will investigate quantitative control of PGCs numbers in Drosophila
embryos, where PGCs are formed by limited divisions of the pole cells, the first true cells to form in the embryo.
We will use live imaging to characterize statistics of pole cell lineages and test the hypothesis that control of
PGC numbers can be explained using a model in which a mitotic clock slowly drifts out of an oscillatory regime.
Given the ubiquitous nature of cytoplasmic flows and conserved mechanisms of PGC regulation, our results will
have broad impact by providing answers to fundamental questions of developmental and reproduction biology.
期刊论文(6)
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DOI:
10.1038/s41567-021-01383-0
发表时间:
2021-12
期刊:
Nature physics
影响因子:
19.6
作者:
[Alsous JI, Rozman J, Marmion RA, Košmrlj A, Shvartsman SY]
通讯作者:
Shvartsman SY
DOI:
10.1016/j.bpj.2022.06.033
发表时间:
2022
期刊:
Biophysical journal
影响因子:
3.4
作者:
[Singh,Jaspreet, ImranAlsous,Jasmin, Garikipati,Krishna, Shvartsman,StanislavY]
通讯作者:
Shvartsman,StanislavY
Author Correction: Forced and spontaneous symmetry breaking in cell polarization.
作者更正:细胞极化中的强迫和自发对称性破缺。
DOI:
10.1038/s43588-022-00345-7
发表时间:
2022
期刊:
Nature computational science
影响因子:
--
作者:
[Miller,PearsonW, Fortunato,Daniel, Muratov,Cyrill, Greengard,Leslie, Shvartsman,Stanislav]
通讯作者:
Shvartsman,Stanislav
DOI:
10.1038/s43588-022-00295-0
发表时间:
2022-08
期刊:
NATURE COMPUTATIONAL SCIENCE
影响因子:
--
作者:
[Miller, Pearson W., Fortunato, Daniel, Muratov, Cyrill, Greengard, Leslie, Shvartsman, Stanislav]
通讯作者:
Shvartsman, Stanislav
DOI:
10.1016/j.cub.2022.02.059
发表时间:
2022-04-25
期刊:
CURRENT BIOLOGY
影响因子:
9.2
作者:
[Stern, Tomer, Shvartsman, Stanislav Y., Wieschaus, Eric F.]
通讯作者:
Wieschaus, Eric F.
Collective dynamics in cell clusters
-
批准号:10194554
-
项目类别:
-
资助金额:$31.52万
-
财政年份:2019
-
负责人:Stanislav Y. Shvartsman
-
依托单位:
Collective dynamics in cell clusters
-
批准号:10448474
-
项目类别:
-
资助金额:$31.52万
-
财政年份:2019
-
负责人:Stanislav Y. Shvartsman
-
依托单位:
Dynamics of epithelial morphogenesis
-
批准号:8695795
-
项目类别:
-
资助金额:$30.48万
-
财政年份:2014
-
负责人:Stanislav Y. Shvartsman
-
依托单位:
Dynamics of epithelial morphogenesis
-
批准号:8998964
-
项目类别:
-
资助金额:$30.6万
-
财政年份:2014
-
负责人:Stanislav Y. Shvartsman
-
依托单位:
Systems biology of MAPK signaling in early drosophila embryo
-
批准号:8725184
-
项目类别:
-
资助金额:$34.07万
-
财政年份:2011
-
负责人:Stanislav Y. Shvartsman
-
依托单位:
Systems biology of MAPK signaling in early drosophila embryo
-
批准号:8038810
-
项目类别:
-
资助金额:$39.59万
-
财政年份:2011
-
负责人:Stanislav Y. Shvartsman
-
依托单位:
Systems biology of MAPK signaling in early drosophila embryo
-
批准号:8530251
-
项目类别:
-
资助金额:$32.9万
-
财政年份:2011
-
负责人:Stanislav Y. Shvartsman
-
依托单位:
Systems biology of MAPK signaling in early drosophila embryo
-
批准号:8332799
-
项目类别:
-
资助金额:$34.13万
-
财政年份:2011
-
负责人:Stanislav Y. Shvartsman
-
依托单位:
Genome wide analysis and modeling of signal integration in the Drosophila ovary
-
批准号:7130302
-
项目类别:
-
资助金额:$24.99万
-
财政年份:2006
-
负责人:Stanislav Y. Shvartsman
-
依托单位:
Genome wide analysis and modeling of signal integration in the Drosophila ovary
-
批准号:7268824
-
项目类别:
-
资助金额:$24.27万
-
财政年份:2006
-
负责人:Stanislav Y. Shvartsman
-
依托单位:
Genome wide analysis and modeling of signal integration in the Drosophila ovary
-
批准号:7478727
-
项目类别:
-
资助金额:$24.27万
-
财政年份:2006
-
负责人:Stanislav Y. Shvartsman
-
依托单位:
Genome wide analysis and modeling of signal integration in the Drosophila ovary
-
批准号:7668446
-
项目类别:
-
资助金额:$24.27万
-
财政年份:2006
-
负责人:Stanislav Y. Shvartsman
-
依托单位:
MSM: CR Multiscale analysis of epithelial patterning: m*
-
批准号:7031418
-
项目类别:
-
资助金额:$24.95万
-
财政年份:2005
-
负责人:Stanislav Y. Shvartsman
-
依托单位:
MSM: CR Multiscale analysis of epithelial patterning: m*
-
批准号:7104893
-
项目类别:
-
资助金额:$22.45万
-
财政年份:2005
-
负责人:Stanislav Y. Shvartsman
-
依托单位:
MSM: CR Multiscale analysis of epithelial patterning: m*
-
批准号:7276093
-
项目类别:
-
资助金额:$21.73万
-
财政年份:2005
-
负责人:Stanislav Y. Shvartsman
-
依托单位:
COMPUTATIONAL CELL BIOLOGY: ANALYSIS OF AUTOCRINE LOOPS
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批准号:6294521
-
项目类别:
-
资助金额:$2.54万
-
财政年份:2000
-
负责人:Stanislav Y. Shvartsman
-
依托单位: