Comparison of Human Ehrlichiosis Agent Genomes

人类埃利希体病病原体基因组的比较

• 批准号: 7676884
• 负责人: YASUKO RIKIHISA
• 金额: $ 36.79万
• 依托单位: OHIO STATE UNIVERSITY
• 依托单位国家: 美国
• 财政年份: 2007
• 资助国家: 美国
• 起止时间: 2007-09-03 至 2011-08-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/7676884
• 关键词: Age; Animal Model; Animals; Antibodies; Arkansas; Bacteria; Bacterial Proteins; CD14 gene; Cell physiology; Cells; Cessation of life; Chemopreventive Agent; Clinical; Cyclic AMP-Dependent Protein Kinases; DNA Sequence; Data; Ehrlichia; Ehrlichia chaffeensis; Ehrlichiosis; Electron Microscopy; Emerging Communicable Diseases; Figs - dietary; Gene Expression Profile; Gene Expression Regulation; Generations; Genes; Genetic Polymorphism; Genome; Genomics; Human; Immune response; Immunocompetent; Immunofluorescence Immunologic; Immunoprecipitation; Immunosuppression; Immunosuppressive Agents; In Vitro; Infection; Inflammation; Inflammatory; Intervention; Membrane Proteins; Mitogen-Activated Protein Kinases; Mus; NF-kappa B; Pathogenesis; Pathogenicity; Pathway interactions; Patients; Phenotype; Plastics; Prevention; Proteins; Publishing; Reactive Oxygen Species; Recombinant Proteins; Research Personnel; Reverse Transcriptase Polymerase Chain Reaction; SCID Mice; Sequence Analysis; Severities; Signal Pathway; Signaling Molecule; Surface; TLR2 gene; TLR4 gene; Techniques; Therapeutic Intervention; Tissues; Transfection; Transferrin Receptor; Variant; Virulence; Virulence Factors; Virulent; base; chemotherapy; comparative; comparative genomic hybridization; cytokine; genome sequencing; genome-wide; insight; macrophage; monocyte; novel; programs; protein complex; receptor; response; vaccine candidate; yeast two hybrid system

DESCRIPTION (provided by applicant): Ehrlichia chaffeensis infects monocytes and macrophages, and causes a potentially fatal emerging infectious disease called Human monocytic ehrlichiosis (HME). The complete E. chaffeensis Arkansas genome sequence was published in 2006. This is also the only strain for which experimental pathogenesis data are available. Severity of HME varies from asymptomatic infection to death. Our overall hypothesis in the proposed study is that comparative genome sequence analysis combined with comparative pathogenesis studies of multiple E. chaffeensis isolates can provide valuable insights into potential E. chaffeensis virulence determinants and new intervention targets. The specific aims are as follows: 1. Identify polymorphic genes or genomic regions of E. chaffeensis strains by CGH using densely tiled microarray and confirm by DNA sequencing. 2. Determine phenotypes of E. chaffeensis strains in established animal models. 3. Analyze temporal transcriptome profiles of hosts in response to E. chaffeensis strains of distinct virulence, and confirm the results using quantitative RT-PCR, and antibodies specific to selected cytokines and host signaling molecules. 4. Functionally characterize polymorphic E. chaffeensis genes associated with virulence 1) by expressing the virulent and the avirulent versions of recombinant proteins or by transfection of host cells with the candidate virulent gene to study their effects on target host cell functions; 2) by making antibodies to the recombinant proteins and localizing the proteins by confocal immunofluorescent or immunogold electron microscopy: 3) by identifying host interacting proteins by immunoprecipitation of host/bacterial protein complexes and by yeast two-hybrid system: 4) by determining in vitro infection neutralizing effects of the antibodies; and/or by immunizing immunocompetent animals with recombinant proteins or passively immunizing SCID mice with specific antibodies, and challenging them with the virulent strain. The proposed study will identify novel E. chaffeensis virulence determinants and their pathogenic mechanisms. The results may point to potential chemotherapy, chemopreventive and/or vaccine candidates for treatment and prevention of human ehrlichiosis.

描述（由申请人提供）：沙菲埃立体感染单核细胞和巨噬细胞，并导致潜在致命的新发传染病，称为人单核细胞埃立体病（HME）。完整的沙非沙叶蝉阿肯色基因组序列于2006年发表。这也是唯一一种有实验发病机理数据的菌株。HME的严重程度从无症状感染到死亡不等。我们在本研究中提出的总体假设是，比较基因组序列分析结合多个沙非埃希菌分离株的比较发病机制研究，可以为沙非埃希菌潜在毒力决定因素和新的干预靶点提供有价值的见解。具体目标如下：