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Synthetic Protein Chemistry

合成蛋白质化学

基本信息

批准号：
8636033
负责人：
PHILIP E DAWSON
金额：
$ 36.01万
依托单位：
SCRIPPS RESEARCH INSTITUTE, THE
依托单位国家：
美国
项目类别：
财政年份：
2011
资助国家：
美国
起止时间：
2011-07-01 至 2015-09-30
项目状态：
已结题

来源：
https://reporter.nih.gov/project-details/8636033
关键词：
Address Amides Amino Acids Antibodies Area Biological Chemicals Chemistry Complement DHFR gene Development Dihydrofolate Reductase Elements Enzymes Excision Fluorescence Functional RNA Goals Investigation Label Laboratories Ligation Link Methodology Methods Molecular Mutagenesis N-terminal Peptide Fragments Peptide Synthesis Peptides Phase Physical condensation Post-Translational Protein Processing Protein Biosynthesis Protein Chemistry Proteins Reaction Science Selenium Series Side Site Site-Directed Mutagenesis Solid Solutions Specialist Spectrum Analysis Structure Sulfhydryl Compounds System Techniques Technology Testing Vertebral column alpha synuclein aqueous base design innovation insight interest novel peptide chemical synthesis polypeptide protein aminoacid sequence protein complex protein function protein structure protein structure function single molecule synthetic protein synuclein thioester tool

项目摘要

DESCRIPTION (provided by applicant): The ability to systematically modify proteins through site directed mutagenesis has transformed protein science, enabling structure-function studies to be performed in a routine manner. However, despite the utility of these methods, there is a growing demand for proteins that are modified in a manner incompatible with normal cellular ribosomal expression. Chemical protein synthesis is attractive for these studies since there are very few limitations on the structural perturbations that can be introduced. As a result, proteins have been synthesized incorporating unnatural amino acid side chains, backbone elements, site-specific post- translational modifications and biophysical probes and have provided numerous unique insights into the molecular basis of protein function. We have addressed the challenge of synthesizing these large organic molecules through the development of chemical ligation strategies that facilitate the conjugation of unprotected peptides derived from solid phase peptide synthesis. However, despite the demonstrated utility of these methods, synthetic protein chemistry remains a challenging endeavor that is practiced by a relatively few number of laboratories. In this proposal, we describe a comprehensive strategy to refine the existing tools of synthetic protein chemistry and introduce novel synthetic approaches with the aim of developing efficient and high yielding syntheses of proteins. Specifically, we propose the development of novel selenium containing amino acids and N-terminal auxiliary groups to facilitate the chemoselective linking of unprotected polypeptides in aqueous solution. To complement these methods, we further develop an approach for the electrophilic thioester peptides using Fmoc based solid phase peptide synthesis approaches. Together, these methodological advances promise to significantly extend the use of chemistry to address questions in protein science. We will test the utility of these methods in the synthesis of several proteins including dihydrofolate reductase, single chain antibodies and alpha synuclein. Overall, we aim to develop and refine innovative synthetic protein chemistry methods with the goal of making protein synthesis a robust and general methodology for the introduction of non-coded probes into biologically interesting and synthetically challenging protein systems.

描述（由申请人提供）：通过定点诱变系统修饰蛋白质的能力已经改变了蛋白质科学，使结构-功能研究能够以常规方式进行。然而，尽管这些方法的效用，有一个不断增长的需求，蛋白质的修饰方式与正常的细胞核糖体表达不相容。化学蛋白质合成是有吸引力的，因为这些研究有很少的限制，可以引入的结构扰动。因此，已经合成了掺入非天然氨基酸侧链、骨架元件、位点特异性翻译后修饰和生物物理探针的蛋白质，并且已经提供了对蛋白质功能的分子基础的许多独特见解。我们已经解决了合成这些大的有机分子的挑战，通过化学连接策略的发展，促进来自固相肽合成的未保护的肽的缀合。然而，尽管这些方法已被证明是实用的，但合成蛋白质化学仍然是一项具有挑战性的奋进，只有相对少数的实验室在实践。在这个建议中，我们描述了一个全面的策略，以完善现有的合成蛋白质化学工具，并引入新的合成方法，目的是开发高效和高产的蛋白质合成。具体而言，我们建议开发新的含硒氨基酸和N-末端辅助基团，以促进未保护的多肽在水溶液中的化学选择性连接。为了补充这些方法，我们进一步开发了一种使用基于Fmoc的固相肽合成方法的亲电硫酯肽的方法。总之，这些方法上的进步有望显着扩展化学的使用，以解决蛋白质科学中的问题。我们将测试这些方法在合成包括二氢叶酸还原酶、单链抗体和α突触核蛋白在内的几种蛋白质中的效用。总的来说，我们的目标是开发和完善创新的合成蛋白质化学方法，使蛋白质合成成为一种强大的通用方法，用于将非编码探针引入生物学上有趣的和具有合成挑战性的蛋白质系统。