Regulation of opposite Wnt target genes in C. elegans embryonic development
Regulation of opposite Wnt target genes in C. elegans embryonic development
批准号:
9470396
负责人:
Jonathan Douglas Rumley
金额:
$4.4万
依托单位国家:
美国
项目类别:
财政年份:
2017
资助国家:
美国
项目状态:
已结题
起止时间:
2017-09-16 至 2019-09-15
关键词:
AnimalsAnteriorBase PairingBindingBinding SitesBiological AssayBiological ModelsBody PatterningCaenorhabditis elegansCatalogsCell Differentiation processCell Fate ControlCell LineageCell MaintenanceCell divisionCellsCharacteristicsColorectal CancerComplementComplexDataDatabasesDaughterDependenceDevelopmentDiseaseDrosophila genusElementsEmbryoEmbryonic DevelopmentEnhancersFutureGap JunctionsGene ExpressionGene TargetingGenesGenetic TranscriptionGenomeGenomicsImage AnalysisLaboratoriesLigandsLogicMalignant NeoplasmsMeasuresMediatingMethodsMolecularMolecular ConformationMusMutateNuclearNucleic Acid Regulatory SequencesPathway interactionsPatternPredictive FactorProcessRNA InterferenceRegulationReporterReporter GenesRepressionResolutionSignal PathwaySignal TransductionSisterSiteSpecific qualifier valueSystemTCF Transcription FactorTestingTrans-ActivatorsTranscription RepressorTransgenic OrganismsWNT Signaling PathwayWorkbeta catenincancer typecofactorembryo cellgenome-wideimprovedin vivomicroscopic imagingmutantreceptorreceptor expressionresponsestem cellstime usetranscription factortranscriptome sequencing
中文摘要
项目总结
英文摘要
Project Summary
Embryonic patterning requires intercellular signaling pathways that trigger molecular switches to precisely
control cell fates. One fundamental step in development is patterning the body axes. Animal anterior-posterior
patterning requires the Wnt pathway, which acts through the transcription factor (TF) TCF and its coactivator β-
catenin. Much is known about how classic targets of this pathway are transcriptionally activated in response to
Wnt. Wnt induces nuclear accumulation of β-catenin, which complexes with TCF and converts it from a
transcriptional repressor to an activator. Many targets, however, are instead repressed by Wnt, and the
mechanisms for this repression are less well understood. Wnt can induce expression of transcriptional
repressors, leading to indirect target repression, but emerging evidence from mouse, Drosophila, and C.
elegans has identified direct “opposite” targets, activated by TCF alone and repressed by TCF:β-catenin in
response to signaling. The C. elegans embryo is an ideal system to define regulatory mechanisms of these
opposite Wnt targets. Almost all cell divisions are patterned by Wnt; after each cell division the posterior sister
cell has high Wnt pathway activity, and the anterior sister cell has the Wnt pathway inactive. Our laboratory has
identified dozens of genes expressed specifically in either anterior or posterior sister cell-derived lineages and
showed that the posterior sister-specific genes are classic Wnt targets, activated when Wnt is active and
repressed when Wnt is inactive. My preliminary data indicate that many genes expressed in anterior sister cells
are regulated by the Wnt pathway and I propose to test the hypothesis that these genes are direct opposite
Wnt targets. I will first test if POP-1/TCF, SYS-1/ β-catenin, and Wnt ligands and receptors are necessary for
proper activation or repression of each of five anterior-specific genes and identify the enhancers controlling
their expression. I will identify sites bound by POP-1 throughout the genome, and test whether any are
necessary for proper expression of the same five opposite Wnt targets as well as genome-wide. For targets
without POP-1 binding, suggesting indirect regulation by Wnt-regulated repressors, I will combine detailed cis-
regulatory analysis of their enhancers with our catalog of lineage-specific TF and classic Wnt target expression
to identify anterior genes indirectly regulated by Wnt through transcriptional repressors. This work will test
whether direct regulation by TCF is a common mechanism for regulation of opposite Wnt targets in C. elegans,
will begin to identify mechanisms for this regulation, and will inform future work in this and other systems.
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