Molecular mechanisms of the CA-SP1 switch in HIV assembly and maturation
Molecular mechanisms of the CA-SP1 switch in HIV assembly and maturation
批准号:
10055953
负责人:
Barbie K. Ganser-Pornillos
金额:
$45.19万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2016
资助国家:
美国
项目状态:
已结题
起止时间:
2016-11-01 至 2022-04-30
关键词:
AIDS/HIV problemAnimalsArchitectureBetulinic AcidBindingBinding SitesBiological ModelsBiophysicsBreathingC-terminalCapsidCapsid ProteinsCellsCollagen FiberCommunicationComplexCrystallizationDeuteriumDevelopmentGenetic PolymorphismGoalsHIVHIV-1HydrogenIn VitroLearningLengthLinkMass Spectrum AnalysisMatrix MetalloproteinasesMediatingMolecularMolecular ConformationMonitorMutationN-terminalNaturePeptide FragmentsPeptide HydrolasesPeptidesPharmaceutical PreparationsPoint MutationPredispositionProcessProteolysisReagentResolutionRetroviridaeRoentgen RaysSiteStructureSystemTestingTimeTranslatingVariantViralVirionVirusVirus AssemblyVirus-like particlealpha helixbiophysical propertiesconformational conversionexperimental studygag Gene Productsin vitro Modelinhibitor/antagonistinnovationnoveloperationoverexpressionparticlepreventprotein protein interactionsmall moleculesmall molecule inhibitorsuccesstargeted treatment
中文摘要
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英文摘要
Project Summary/Abstract
HIV initially assembles as a non-infectious, immature particle that must undergo a maturation process to
become infectious. Assembly and maturation involve large-scale rearrangements of the viral capsid. These
large-scale rearrangements, in turn, are associated with programmed local conformational changes in capsid
protein segments termed molecular switches. In these studies, we will use structural, biophysical, and other
complementary approaches to understand the structure of the immature HIV-1 capsid and how a molecular
switch spanning the CA-SP1 region of the HIV-1 Gag protein controls immature virus assembly and
maturation. We propose to: (1) Test the hypothesis that the CA-SP1 junction folds into a 6-helix bundle that
undergoes reversible and cooperative unfolding and folding within immature virions to regulate access of the
viral protease during maturation. We will also determine how small molecule maturation inhibitors like bevirimat
disrupt this process by binding and stabilizing the 6-helix bundle. We will also initiate experiments to
understand how Gag-Gag interactions change during the early stages of maturation. (2) Elucidate the detailed
molecular organization of the immature HIV-1 Gag lattice. In particular, we will determine the high resolution
details of how the outermost set of Gag-Gag interactions (mediated by the CA-NTD domain) are organized
within the immature particle. We will also test the hypotheses that interactions between the CA-NTD layer and
the underlying CA-CTD layer are important for proper assembly and may be part of a structural network that
links two molecular switches that flank the CA region. Finally, we will also analyze the immature Gag lattices of
other retroviruses, in order to elucidate the general nature of switch-mediated Gag assembly. If successful,
these studies will lead to a thorough understanding of the immature capsid structure of retroviruses, how local
conformational transitions translate into large-scale capsid rearragenements during retroviral assembly and
maturation, and how small molecule inhibitors may be deployed to disrupt capsid rearrangement.
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DOI:
10.1038/s41467-023-36569-y
发表时间:
2023-03-04
期刊:
NATURE COMMUNICATIONS
影响因子:
16.6
作者:
[Sarkar, Sucharita, Zadrozny, Kaneil K., Zadorozhnyi, Roman, Russell, Ryan W., Quinn, Caitlin M., Kleinpeter, Alex, Ablan, Sherimay, Meshkin, Hamed, Perilla, Juan R., Freed, Eric O., Ganser-Pornillos, Barbie K., Pornillos, Owen, Gronenborn, Angela M., Polenova, Tatyana]
通讯作者:
Polenova, Tatyana
DOI:
10.1038/s41586-018-0396-4
发表时间:
2018-08
期刊:
Nature
影响因子:
64.8
作者:
[Dick RA, Zadrozny KK, Xu C, Schur FKM, Lyddon TD, Ricana CL, Wagner JM, Perilla JR, Ganser-Pornillos BK, Johnson MC, Pornillos O, Vogt VM]
通讯作者:
Vogt VM
DOI:
10.1073/pnas.2117781119
发表时间:
2022-03-08
期刊:
Proceedings of the National Academy of Sciences of the United States of America
影响因子:
11.1
作者:
[Yu A, Lee EMY, Briggs JAG, Ganser-Pornillos BK, Pornillos O, Voth GA]
通讯作者:
Voth GA
DOI:
10.3389/fmolb.2021.767040
发表时间:
2021
期刊:
Frontiers in molecular biosciences
影响因子:
5
作者:
[Zadorozhnyi R, Sarkar S, Quinn CM, Zadrozny KK, Ganser-Pornillos BK, Pornillos O, Gronenborn AM, Polenova T]
通讯作者:
Polenova T
DOI:
10.1002/prot.26204
发表时间:
2022-01
期刊:
Proteins
影响因子:
2.9
作者:
[Zurowska K, Alam A, Ganser-Pornillos BK, Pornillos O]
通讯作者:
Pornillos O
共 6 条
Project 1. Maturation and Assembly
-
批准号:10653262
-
项目类别:
-
资助金额:$51.71万
-
财政年份:2022
-
负责人:Barbie K. Ganser-Pornillos
-
依托单位:
Project 1. Maturation and Assembly
-
批准号:10506952
-
项目类别:
-
资助金额:$48.51万
-
财政年份:2022
-
负责人:Barbie K. Ganser-Pornillos
-
依托单位:
Is the HIV-1 capsid modulated by a pentamer switch?
-
批准号:10402590
-
项目类别:
-
资助金额:$24.23万
-
财政年份:2021
-
负责人:Barbie K. Ganser-Pornillos
-
依托单位:
Structure Analysis of Viral Assembly Mechanisms
-
批准号:8142303
-
项目类别:
-
资助金额:$40.28万
-
财政年份:2003
-
负责人:Barbie K. Ganser-Pornillos
-
依托单位:
Structure Analysis of Viral Assembly Mechanisms
-
批准号:8269842
-
项目类别:
-
资助金额:$40.4万
-
财政年份:2003
-
负责人:Barbie K. Ganser-Pornillos
-
依托单位:
Structure Analysis of Viral Assembly Mechanisms
-
批准号:8456141
-
项目类别:
-
资助金额:$38.99万
-
财政年份:2003
-
负责人:Barbie K. Ganser-Pornillos
-
依托单位:
海外基金